RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 URB1O60287 2271 aaKnown RBP12.45□□□□□ -0.42
UBE3B-210ENST00000539599 MPTX1A8MV57 137 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 ZNF17P17021 662 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 LAP3P28838 519 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 MMP16P51512 607 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 P2RY4P51582 365 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 AKR1C2P52895 323 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 AKR1C1Q04828 323 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 UEVLDQ8IX04 471 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 CDH26Q8IXH8 852 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 LRRC18Q8N456 261 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 NAXEQ8NCW5 288 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 OR5M8Q8NGP6 311 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 TMEM41AQ96HV5 264 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 SPSB2Q99619 263 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 MRPL13Q9BYD1 178 aaKnown RBP12.45□□□□□ -0.42
UBE3B-210ENST00000539599 ZNHIT1O43257 154 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 TRAF3IP2O43734 574 aaPredicted RBP12.44□□□□□ -0.42
UBE3B-210ENST00000539599 AQP8O94778 261 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 CD74P04233 296 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 QDPRP09417 244 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 PGA4P0DJD7 388 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 PGA3P0DJD8 388 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 NAGAP17050 411 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 NPY4RP50391 375 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 ZP4Q12836 540 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 COL19A1Q14993 1142 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 PHYHD1Q5SRE7 291 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 WDSUB1Q8N9V3 476 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 ST8SIA2Q92186 375 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 VRK1Q99986 396 aaPredicted RBP12.44□□□□□ -0.42
UBE3B-210ENST00000539599 IFT46Q9NQC8 304 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 ALKBH4Q9NXW9 302 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 ZFHX4Q86UP3 3567 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 SDCBPO00560 298 aaPredicted RBP12.44□□□□□ -0.42
UBE3B-210ENST00000539599 RAB3AP20336 220 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 IL13RA1P78552 427 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 OR5AS1Q8N127 324 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 WNT2BQ93097 391 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 MARVELD3Q96A59 401 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 JSRP1Q96MG2 331 aaPredicted RBP12.44□□□□□ -0.42
UBE3B-210ENST00000539599 GNRHR2Q96P88 292 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 ZNF471Q9BX82 626 aaPredicted RBP12.44□□□□□ -0.42
UBE3B-210ENST00000539599 WIF1Q9Y5W5 379 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 ZDBF2Q9HCK1 2354 aa12.44□□□□□ -0.42
UBE3B-210ENST00000539599 LY6G6EA0A0G2JKS1 128 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 IGHV5-10-1A0A0J9YXX1 117 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 RNF222A6NCQ9 220 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 METTL21EPA6NDL7 271 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 SIGLEC6O43699 453 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 ZNF205O95201 554 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 HTR3BO95264 441 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 HCKP08631 526 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 ZNF20P17024 532 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 PRKACBP22694 351 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 ZBTB25P24278 435 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 DHPSP49366 369 aaPredicted RBP12.43□□□□□ -0.42
UBE3B-210ENST00000539599 SGCAQ16586 387 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 PHF19Q5T6S3 580 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 TMEM71Q6P5X7 295 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 WDR74Q6RFH5 385 aaPredicted RBP12.43□□□□□ -0.42
UBE3B-210ENST00000539599 CPEB2Q7Z5Q1 589 aaKnown RBP12.43□□□□□ -0.42
UBE3B-210ENST00000539599 NOXO1Q8NFA2 376 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 CCDC107Q8WV48 283 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 CCDC74BQ96LY2 380 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 RASL10BQ96S79 203 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 EDEM2Q9BV94 578 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 LPAR5Q9H1C0 372 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 RAB22AQ9UL26 194 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 U3KQA8 63 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 SPENQ96T58 3664 aaKnown RBP12.43□□□□□ -0.42
UBE3B-210ENST00000539599 C9orf170A2RU37 121 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 TTLL8A6PVC2 850 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 DBHP09172 617 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 GMFBP60983 142 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 DCDP81605 110 aaKnown RBP12.43□□□□□ -0.42
UBE3B-210ENST00000539599 SLC9A3R2Q15599 337 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 MICBQ29980 383 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 SLC22A24Q8N4F4 322 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 OR5M9Q8NGP3 310 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 ZNF837Q96EG3 531 aaPredicted RBP12.43□□□□□ -0.42
UBE3B-210ENST00000539599 UCN2Q96RP3 112 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 SLC25A21Q9BQT8 299 aaPredicted RBP12.43□□□□□ -0.42
UBE3B-210ENST00000539599 ZNF581Q9P0T4 197 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 UPB1Q9UBR1 384 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 MRPS28Q9Y2Q9 187 aaKnown RBP12.43□□□□□ -0.42
UBE3B-210ENST00000539599 ADAMTS9Q9P2N4 1935 aa12.43□□□□□ -0.42
UBE3B-210ENST00000539599 IGKV1-9A0A0C4DH69 117 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 MEGF11A6BM72 1044 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 F5H5K5 113 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 ADAP1O75689 374 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 APOC3P02656 99 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 RPA2P15927 270 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 ZP3P21754 424 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 DLSTP36957 453 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 CX3CR1P49238 355 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 TMEM50BP56557 158 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 CLDN17P56750 224 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 JMJD6Q6NYC1 403 aaPredicted RBP12.42□□□□□ -0.42
UBE3B-210ENST00000539599 ZNF283Q8N7M2 679 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms