RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 KCNJ16Q9NPI9 418 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 NDUFA13Q9P0J0 144 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 RSL24D1Q9UHA3 163 aaKnown RBP12.27□□□□□ -0.45
CD4-208ENST00000538827 NUFIP1Q9UHK0 495 aaKnown RBP12.27□□□□□ -0.45
CD4-208ENST00000538827 ZNF281Q9Y2X9 895 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 SF3B6Q9Y3B4 125 aaKnown RBP12.27□□□□□ -0.45
CD4-208ENST00000538827 HIVEP3Q5T1R4 2406 aa12.27□□□□□ -0.45
CD4-208ENST00000538827 ADGRG4Q8IZF6 3080 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 A0A1B0GVI7 797 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 C5orf63A6NC05 138 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 A6NHS1 94 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 GABRPO00591 440 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 GPX5O75715 221 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 GABARAPO95166 117 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 TTRP02766 147 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 CECR9P0C854 216 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 CD53P19397 219 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 ACHEP22303 614 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 ANOS1P23352 680 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 OTX1P32242 354 aaPredicted RBP12.26□□□□□ -0.45
CD4-208ENST00000538827 SOX2P48431 317 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 FABP5Q01469 135 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 GPR50Q13585 617 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 INSL4Q14641 139 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 CDSNQ15517 529 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 TRAM1Q15629 374 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 RSPO1Q2MKA7 263 aaPredicted RBP12.26□□□□□ -0.45
CD4-208ENST00000538827 SNAI3Q3KNW1 292 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 KRTAP27-1Q3LI81 207 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 FOXB2Q5VYV0 432 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 SLC16A12Q6ZSM3 486 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 RDH10Q8IZV5 341 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 OR10AC1Q8NH08 325 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 RGP1Q92546 391 aaPredicted RBP12.26□□□□□ -0.45
CD4-208ENST00000538827 FAM71F1Q96KD3 344 aaPredicted RBP12.26□□□□□ -0.45
CD4-208ENST00000538827 POM121L2Q96KW2 1035 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 DCLRE1CQ96SD1 692 aaKnown RBP12.26□□□□□ -0.45
CD4-208ENST00000538827 MED18Q9BUE0 208 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 SP140LQ9H930 580 aa12.26□□□□□ -0.45
CD4-208ENST00000538827 IGHV1-18A0A0C4DH31 117 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 SERPINA3P01011 423 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 HLA-DPB1P04440 258 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 CD1AP06126 327 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 VBP1P61758 197 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 SNTB1Q13884 538 aaKnown RBP12.25□□□□□ -0.45
CD4-208ENST00000538827 FBXL19-AS1Q494R0 122 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 YIF1BQ5BJH7 314 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 GLYATL3Q5SZD4 288 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 TMEM244Q5VVB8 128 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 C22orf42Q6IC83 251 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 ELMOD2Q8IZ81 293 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 PAQR4Q8N4S7 273 aaPredicted RBP12.25□□□□□ -0.45
CD4-208ENST00000538827 ZNF808Q8N4W9 903 aaPredicted RBP12.25□□□□□ -0.45
CD4-208ENST00000538827 MS4A15Q8N5U1 240 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 OR13C3Q8NGS6 347 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 OR2AE1Q8NHA4 323 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 ABHD4Q8TB40 342 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 OR51E1Q8TCB6 317 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 RAB2BQ8WUD1 216 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 ITLN2Q8WWU7 325 aaPredicted RBP12.25□□□□□ -0.45
CD4-208ENST00000538827 TRMT61AQ96FX7 289 aaKnown RBP12.25□□□□□ -0.45
CD4-208ENST00000538827 ZNF75AQ96N20 296 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 OR14A2Q96R54 314 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 KCNS3Q9BQ31 491 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 USB1Q9BQ65 265 aaKnown RBP12.25□□□□□ -0.45
CD4-208ENST00000538827 FAM192AQ9GZU8 254 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 MOV10Q9HCE1 1003 aaKnown RBP12.25□□□□□ -0.45
CD4-208ENST00000538827 GPR84Q9NQS5 396 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 PTTG3PQ9NZH4 202 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 NPAP1Q9NZP6 1156 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 HHLA2Q9UM44 414 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 DHDHQ9UQ10 334 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 APCP25054 2843 aa12.25□□□□□ -0.45
CD4-208ENST00000538827 ACOD1A6NK06 481 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 H3BMQ9 156 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 SYT7O43581 403 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 CLDN14O95500 239 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 IGKV3-15P01624 115 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 OCM2P0CE71 109 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 FAM157BP0CG42 384 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 TGFBR1P36897 503 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 CRYBB2P43320 205 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 MAGEB1P43366 347 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 TMBIM6P55061 237 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 NCS1P62166 190 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 ACSM3Q53FZ2 586 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 RFPL4BQ6ZWI9 263 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 PRSS45Q7RTY3 260 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 CEACAM19Q7Z692 300 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 OR52H1Q8NGJ2 320 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 OR51A4Q8NGJ6 313 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 ZNF420Q8TAQ5 688 aaPredicted RBP12.24□□□□□ -0.45
CD4-208ENST00000538827 GPR148Q8TDV2 347 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 C12orf43Q96C57 262 aaKnown RBP12.24□□□□□ -0.45
CD4-208ENST00000538827 REEP6Q96HR9 211 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 CENPOQ9BU64 300 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 OR10A4Q9H209 315 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 RNF167Q9H6Y7 350 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 TXNL4BQ9NX01 149 aaKnown RBP12.24□□□□□ -0.45
CD4-208ENST00000538827 ZNF319Q9P2F9 582 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms