RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 HLA-AP01891 365 aaKnown RBP11.67□□□□□ -0.54
LDLR-203ENST00000535915 ZNF43P17038 809 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 ZNF93P35789 620 aaPredicted RBP11.67□□□□□ -0.54
LDLR-203ENST00000535915 P2RY4P51582 365 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 LY6G6FQ5SQ64 297 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 PHF19Q5T6S3 580 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 PRAMEF20Q5VT98 475 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 LYSMD4Q5XG99 296 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 OR52W1Q6IF63 320 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 ABHD12BQ7Z5M8 362 aaPredicted RBP11.67□□□□□ -0.54
LDLR-203ENST00000535915 ANGPTL5Q86XS5 388 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 ADPRHL1Q8NDY3 354 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 CLDN23Q96B33 292 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 SPACA5Q96QH8 159 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 PRRT1Q99946 306 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 EDEM2Q9BV94 578 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 SLC5A6Q9Y289 635 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 NOP16Q9Y3C1 178 aaKnown RBP11.67□□□□□ -0.54
LDLR-203ENST00000535915 hCG_1807616A0A1W2PRN6 198 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 B3GALNT1O75752 331 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 GNB3P16520 340 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 GABREP78334 506 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 GK2Q14410 553 aaPredicted RBP11.66□□□□□ -0.54
LDLR-203ENST00000535915 TMEM176BQ3YBM2 270 aaPredicted RBP11.66□□□□□ -0.54
LDLR-203ENST00000535915 SLC22A6Q4U2R8 563 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 ZNF101Q8IZC7 436 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 BEST3Q8N1M1 668 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 SCARB1Q8WTV0 552 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 EDAQ92838 391 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 MYOZ1Q9NP98 299 aaPredicted RBP11.66□□□□□ -0.54
LDLR-203ENST00000535915 IFT46Q9NQC8 304 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 OCIAD1Q9NX40 245 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 ZNF230Q9UIE0 474 aaPredicted RBP11.66□□□□□ -0.54
LDLR-203ENST00000535915 A0A1B0GTI1 187 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 RFPL4AA6NLU0 287 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 RFPL4AL1F8VTS6 287 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 RAMP1O60894 148 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 ABOP16442 354 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 CD34P28906 385 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 QRFPP83859 136 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 WDSUB1Q8N9V3 476 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 ST8SIA2Q92186 375 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 CXorf58Q96LI9 332 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 OXGR1Q96P68 337 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 MOB1AQ9H8S9 216 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 VSIG4Q9Y279 399 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 MYO7BQ6PIF6 2116 aa11.66□□□□□ -0.54
LDLR-203ENST00000535915 OR14I1A6ND48 311 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 ZNF726A6NNF4 738 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 RER1O15258 196 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 ERCC1P07992 297 aaPredicted RBP11.65□□□□□ -0.54
LDLR-203ENST00000535915 NMBP08949 121 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 QDPRP09417 244 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 RPA2P15927 270 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 GFOD2Q3B7J2 385 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 SLC25A47Q6Q0C1 308 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 NAXDQ8IW45 347 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 OR8B12Q8NGG6 310 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 OR6X1Q8NH79 312 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 SAP25Q8TEE9 199 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 HLA-CQ95604 372 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 ZBTB8AQ96BR9 441 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 SELENOIQ9C0D9 397 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 ZNF175Q9Y473 711 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 B3GALT1Q9Y5Z6 326 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 DMDP11532 3685 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 SULT2B1O00204 365 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 KLK2P20151 261 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 ZNF121P58317 390 aaPredicted RBP11.65□□□□□ -0.54
LDLR-203ENST00000535915 LIN54Q6MZP7 749 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 ZNF529Q6P280 563 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 RNF144BQ7Z419 303 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 ZNF546Q86UE3 836 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 OR5M8Q8NGP6 311 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 FAM71F1Q96KD3 344 aaPredicted RBP11.65□□□□□ -0.54
LDLR-203ENST00000535915 SOX7Q9BT81 388 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 PDCD10Q9BUL8 212 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 C1QTNF6Q9BXI9 259 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 GPR84Q9NQS5 396 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 SDHAF2Q9NX18 166 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 SLC2A8Q9NY64 477 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 PLEKHA6Q9Y2H5 1048 aa11.65□□□□□ -0.54
LDLR-203ENST00000535915 TRIOBPQ9H2D6 2365 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 CNTRLQ7Z7A1 2325 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 TRAV14DV4A0A0A6YYC5 116 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 GDF9O60383 454 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 SCGNO76038 276 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 SPDEFO95238 335 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 ONECUT2O95948 504 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 HRH1P35367 487 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 NUP62P37198 522 aaPredicted RBP11.64□□□□□ -0.55
LDLR-203ENST00000535915 OR10R2Q8NGX6 335 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 SLC25A43Q8WUT9 341 aaPredicted RBP11.64□□□□□ -0.55
LDLR-203ENST00000535915 LINC00052Q96N35 136 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 NICN1Q9BSH3 213 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 SLC26A1Q9H2B4 701 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 SIT1Q9Y3P8 196 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 RTTNQ86VV8 2226 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 OR5H14A6NHG9 310 aa11.64□□□□□ -0.55
LDLR-203ENST00000535915 CCSO14618 274 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms