RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 CLSTN2Q9H4D0 955 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 FBXO44Q9H4M3 255 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 MRM3Q9HC36 420 aaKnown RBP2.52□□□□□ -2.01
PRKDC-205ENST00000535375 PIKFYVEQ9Y2I7 2098 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 DENND4AQ7Z401 1863 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 BRWD3Q6RI45 1802 aa2.52□□□□□ -2.01
PRKDC-205ENST00000535375 TNIKQ9UKE5 1360 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 A0A0J9YYE9 177 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 A0A1B0GUH1 482 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 SLC22A20A6NK97 555 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 H7C417 338 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 NME4O00746 187 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 XRCC2O43543 280 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 FARS2O95363 451 aaKnown RBP2.51□□□□□ -2.01
PRKDC-205ENST00000535375 TRBC1P01850 177 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 CTSLP07711 333 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 CD3GP09693 182 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 OR56A5P0C7T3 313 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 ERGP11308 486 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 PPP1CBP62140 327 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 PITPNAQ00169 270 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 KIR2DS1Q14954 304 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 PLET1Q6UQ28 207 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 NTM-AS1Q6ZSK4 140 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 VTCN1Q7Z7D3 282 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 LRP11Q86VZ4 500 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 HORMAD1Q86X24 394 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 OR10W1Q8NGF6 305 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 OR5AR1Q8NGP9 310 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 OR6Q1Q8NGQ2 317 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 ITFG1Q8TB96 612 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 NTAN1Q96AB6 310 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 ZNF317Q96PQ6 595 aaPredicted RBP2.51□□□□□ -2.01
PRKDC-205ENST00000535375 CHRAC1Q9NRG0 131 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 MTFP1Q9UDX5 166 aa2.51□□□□□ -2.01
PRKDC-205ENST00000535375 IGLV1-50A0A075B6I6 118 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 TRAV6A0A075B6T7 132 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 KIR2DS1A0A191URI9 304 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 EIF4EP06730 217 aaKnown RBP2.5□□□□□ -2.01
PRKDC-205ENST00000535375 PGA4P0DJD7 388 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 PGA3P0DJD8 388 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 PGA5P0DJD9 388 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 RAB3AP20336 220 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 CFHR2P36980 270 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 GPR1P46091 355 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 SERPINB8P50452 374 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 ZNF33AQ06730 810 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 LOXL1Q08397 574 aaPredicted RBP2.5□□□□□ -2.01
PRKDC-205ENST00000535375 CDH17Q12864 832 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 RCAN2Q14206 197 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 GABRA6Q16445 453 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 GCSAMLQ5JQS6 135 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 AVPI1Q5T686 147 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 ADNP2Q6IQ32 1131 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 ULK3Q6PHR2 472 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 ASCL4Q6XD76 172 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 PRSS58Q8IYP2 241 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 FAM71AQ8IYT1 594 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 VKORC1L1Q8N0U8 176 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 OSR2Q8N2R0 312 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 CA5BP1Q8WTZ4 195 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 KIAA1143Q96AT1 154 aaPredicted RBP2.5□□□□□ -2.01
PRKDC-205ENST00000535375 APH1AQ96BI3 265 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 AGMATQ9BSE5 352 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 CALN1Q9BXU9 219 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 SYNDIG1Q9H7V2 258 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 CTSFQ9UBX1 484 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 ADAMTS13Q76LX8 1427 aa2.5□□□□□ -2.01
PRKDC-205ENST00000535375 PCM1Q15154 2024 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 CABIN1Q9Y6J0 2220 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 ARPC4-TTLL3A0A0A6YYG9 625 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 IGHV3OR16-9A0A0B4J2B5 98 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 A0A1W2PPV4 95 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 ZNF233A6NK53 670 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 PDZK1P1A8MUH7 402 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 H7C1H1 209 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 GABRPO00591 440 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 KDELR3O43731 214 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 TDP2O95551 362 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 KRT16P08779 473 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 GFAPP14136 432 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 GABRG2P18507 467 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 PFN2P35080 140 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 BMI1P35226 326 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 BCAP31P51572 246 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 SYNJ2BPP57105 145 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 VSX2P58304 361 aaPredicted RBP2.49□□□□□ -2.01
PRKDC-205ENST00000535375 LCN2P80188 198 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 SLC39A6Q13433 755 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 PIGHQ14442 188 aaPredicted RBP2.49□□□□□ -2.01
PRKDC-205ENST00000535375 IRF4Q15306 451 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 C5orf64Q2M2E5 130 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 METTL21CQ5VZV1 264 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 TMEM205Q6UW68 189 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 C12orf54Q6X4T0 127 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 MRPL55Q7Z7F7 128 aaKnown RBP2.49□□□□□ -2.01
PRKDC-205ENST00000535375 OR51E1Q8TCB6 317 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 RAB1CQ92928 201 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 NARS2Q96I59 477 aaKnown RBP2.49□□□□□ -2.01
PRKDC-205ENST00000535375 BTN2A3PQ96KV6 586 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms