RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 LANCL1O43813 399 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 CDH16O75309 829 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 MFN2O95140 757 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 ETHE1O95571 254 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 FGGP02679 453 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 HSP90AA1P07900 732 aaKnown RBP-0.28□□□□□ -2.45
COPB1-212ENST00000534771 TROVE2P10155 538 aaKnown RBP eCLIP-0.28□□□□□ -2.45
COPB1-212ENST00000534771 IL9P15248 144 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 HLA-DPA1P20036 260 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 PCK1P35558 622 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 GPX4P36969 197 aaPredicted RBP-0.28□□□□□ -2.45
COPB1-212ENST00000534771 PLP1P60201 277 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 RPS15AP62244 130 aaKnown RBP-0.28□□□□□ -2.45
COPB1-212ENST00000534771 PSG4Q00888 419 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 MRPL28Q13084 256 aaKnown RBP-0.28□□□□□ -2.45
COPB1-212ENST00000534771 DHRS2Q13268 280 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 ACSBG2Q5FVE4 666 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 ARMC3Q5W041 872 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 OPN5Q6U736 354 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 CD300LGQ6UXG3 332 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 RBM43Q6ZSC3 357 aaKnown RBP-0.28□□□□□ -2.45
COPB1-212ENST00000534771 BBS7Q8IWZ6 715 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 CENPLQ8N0S6 344 aaPredicted RBP-0.28□□□□□ -2.45
COPB1-212ENST00000534771 TMEM123Q8N131 208 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 PDIK1LQ8N165 341 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 C3orf22Q8N5N4 141 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 SLC25A29Q8N8R3 303 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 ZFP62Q8NB50 900 aaPredicted RBP-0.28□□□□□ -2.45
COPB1-212ENST00000534771 MFSD9Q8NBP5 474 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 SPC24Q8NBT2 197 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 CHST4Q8NCG5 386 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 BPIFB6Q8NFQ5 453 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 OR2V1Q8NHB1 315 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 PIBF1Q8WXW3 757 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 CTNNBL1Q8WYA6 563 aaPredicted RBP-0.28□□□□□ -2.45
COPB1-212ENST00000534771 THRSPQ92748 146 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 OSTF1Q92882 214 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 MRPL38Q96DV4 380 aaKnown RBP-0.28□□□□□ -2.45
COPB1-212ENST00000534771 SLC38A2Q96QD8 506 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 OR4K3Q96R72 315 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 GPA33Q99795 319 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 SPZ1Q9BXG8 430 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 CYSTM1Q9H1C7 97 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 PRORYQ9H606 182 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 CWH43Q9H720 699 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 CYP3A43Q9HB55 503 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 TMEM9BQ9NQ34 198 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 PIPOXQ9P0Z9 390 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 STX18Q9P2W9 335 aaKnown RBP-0.28□□□□□ -2.45
COPB1-212ENST00000534771 MTFP1Q9UDX5 166 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 IKZF2Q9UKS7 526 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 CES1P1Q9UKY3 287 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 RAB22AQ9UL26 194 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 ING4Q9UNL4 249 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 GOLT1BQ9Y3E0 138 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 ICOSQ9Y6W8 199 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 MICAL3Q7RTP6 2002 aa-0.28□□□□□ -2.45
COPB1-212ENST00000534771 PXDNLA1KZ92 1463 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 BRCA1P38398 1863 aaKnown RBP-0.29□□□□□ -2.46
COPB1-212ENST00000534771 FHOD3Q2V2M9 1422 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 IGKV1-27A0A075B6S5 117 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 A0A0B4J2C4 111 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 IGKV3D-7A0A0C4DH55 119 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 IGKV1-6A0A0C4DH72 117 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 IGKV3OR2-268A0A0C4DH90 116 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 LRRIQ3A6PVS8 624 aaPredicted RBP-0.29□□□□□ -2.46
COPB1-212ENST00000534771 HMGB1P1B2RPK0 211 aaPredicted RBP-0.29□□□□□ -2.46
COPB1-212ENST00000534771 IGLL5B9A064 214 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 PLPP1O14494 284 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 PPP1R2P9O14990 202 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 MAPK13O15264 365 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 SCGB2A1O75556 95 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 SCGNO76038 276 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 C1orf105O95561 183 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 PTBP3O95758 552 aaKnown RBP-0.29□□□□□ -2.46
COPB1-212ENST00000534771 CLIC3O95833 236 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 OXTP01178 125 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 ARG1P05089 322 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 CALCBP10092 127 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 GGT1P19440 569 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 BLVRBP30043 206 aaPredicted RBP-0.29□□□□□ -2.46
COPB1-212ENST00000534771 CCND2P30279 289 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 HNRNPH3P31942 346 aaKnown RBP-0.29□□□□□ -2.46
COPB1-212ENST00000534771 CHI3L1P36222 383 aaPredicted RBP-0.29□□□□□ -2.46
COPB1-212ENST00000534771 SLC1A2P43004 574 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 TAS2R46P59540 309 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 GPX6P59796 221 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 YWHAGP61981 247 aaKnown RBP eCLIP-0.29□□□□□ -2.46
COPB1-212ENST00000534771 PRR3P79522 188 aaKnown RBP-0.29□□□□□ -2.46
COPB1-212ENST00000534771 SLC25A11Q02978 314 aaKnown RBP-0.29□□□□□ -2.46
COPB1-212ENST00000534771 HES1Q14469 280 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 OR7A5Q15622 319 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 ZNF77Q15935 545 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 TMEM41BQ5BJD5 291 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 FAM201AQ5SY85 155 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 GPR107Q5VW38 600 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 OR4F3Q6IEY1 312 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 ANKRD26P1Q6NSI1 321 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 LRRC74BQ6ZQY2 392 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 CCDC73Q6ZRK6 1079 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms