RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 TENM3Q9P273 2699 aa11.84□□□□□ -0.51
CDC27-209ENST00000532893 IGHV3OR15-7A0A075B7D8 119 aa11.83□□□□□ -0.52
CDC27-209ENST00000532893 F5H5K5 113 aa11.83□□□□□ -0.52
CDC27-209ENST00000532893 CDC42EP2O14613 210 aa11.83□□□□□ -0.52
CDC27-209ENST00000532893 NPFFO15130 113 aa11.83□□□□□ -0.52
CDC27-209ENST00000532893 PAHP00439 452 aa11.83□□□□□ -0.52
CDC27-209ENST00000532893 LCATP04180 440 aa11.83□□□□□ -0.52
CDC27-209ENST00000532893 IFNA8P32881 189 aa11.83□□□□□ -0.52
CDC27-209ENST00000532893 KCNMB1Q16558 191 aa11.83□□□□□ -0.52
CDC27-209ENST00000532893 C11orf91Q3C1V1 193 aa11.83□□□□□ -0.52
CDC27-209ENST00000532893 NSUN5P1Q3KNT7 163 aa11.83□□□□□ -0.52
CDC27-209ENST00000532893 ZBED5Q49AG3 693 aa11.83□□□□□ -0.52
CDC27-209ENST00000532893 NANOGP8Q6NSW7 305 aa11.83□□□□□ -0.52
CDC27-209ENST00000532893 TBPL2Q6SJ96 375 aa11.83□□□□□ -0.52
CDC27-209ENST00000532893 PGAP1Q75T13 922 aa11.83□□□□□ -0.52
CDC27-209ENST00000532893 KLHDC1Q8N7A1 406 aa11.83□□□□□ -0.52
CDC27-209ENST00000532893 TPD52L3Q96J77 140 aa11.83□□□□□ -0.52
CDC27-209ENST00000532893 PRRC1Q96M27 445 aa11.83□□□□□ -0.52
CDC27-209ENST00000532893 NUAK2Q9H093 628 aa11.83□□□□□ -0.52
CDC27-209ENST00000532893 NMNAT1Q9HAN9 279 aaPredicted RBP11.83□□□□□ -0.52
CDC27-209ENST00000532893 COL7A1Q02388 2944 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 A0A1B0GW55 424 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 MEIOCA2RUB1 952 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 IFNA14P01570 189 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 GRPP07492 148 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 ACSM4P0C7M7 580 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 DUX4L2P0CJ85 424 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 DUX4L3P0CJ86 424 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 DUX4L4P0CJ87 422 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 DUX4L5P0CJ88 424 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 DUX4L6P0CJ89 424 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 DUX4L7P0CJ90 424 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 KIR2DS4P43632 304 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 GPR4P46093 362 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 ELF3P78545 371 aaPredicted RBP11.82□□□□□ -0.52
CDC27-209ENST00000532893 GUCA2AQ02747 115 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 MALLQ13021 153 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 KLRD1Q13241 179 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 KRR1Q13601 381 aaKnown RBP11.82□□□□□ -0.52
CDC27-209ENST00000532893 CYBRD1Q53TN4 286 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 RABL3Q5HYI8 236 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 DUX4L9Q6RFH8 374 aaPredicted RBP11.82□□□□□ -0.52
CDC27-209ENST00000532893 METAP1DQ6UB28 335 aaPredicted RBP11.82□□□□□ -0.52
CDC27-209ENST00000532893 CALHM3Q86XJ0 350 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 PNKDQ8N490 385 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 GCSAMQ8N6F7 178 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 SPERTQ8NA61 448 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 PLPP7Q8NBV4 271 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 LY6G5BQ8NDX9 201 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 CCL13Q99616 98 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 ADAT1Q9BUB4 502 aaKnown RBP11.82□□□□□ -0.52
CDC27-209ENST00000532893 FNDC11Q9BVV2 318 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 SLC22A4Q9H015 551 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 KAAG1Q9UBP8 84 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 DUX4Q9UBX2 424 aa11.82□□□□□ -0.52
CDC27-209ENST00000532893 NOP16Q9Y3C1 178 aaKnown RBP11.82□□□□□ -0.52
CDC27-209ENST00000532893 hCG_1807616A0A1W2PRN6 198 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 A6NLC8 198 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 CD300LBA8K4G0 201 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 J3KTA2 159 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 GMDSO60547 372 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 PTBP3O95758 552 aaKnown RBP11.81□□□□□ -0.52
CDC27-209ENST00000532893 MPIG6BO95866 241 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 VSIG10L2P0DP72 767 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 TRAM2Q15035 370 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 KRTAP27-1Q3LI81 207 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 LRRC23Q53EV4 343 aaPredicted RBP11.81□□□□□ -0.52
CDC27-209ENST00000532893 C11orf87Q6NUJ2 197 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 ZNF730Q6ZMV8 503 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 PTCHD4Q6ZW05 846 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 MRPL21Q7Z2W9 205 aaKnown RBP11.81□□□□□ -0.52
CDC27-209ENST00000532893 CMTM4Q8IZR5 234 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 Q8N7P7 452 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 FAM156AQ8NDB6 213 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 PHF21AQ96BD5 680 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 TSSK2Q96PF2 358 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 PITX2Q99697 317 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 VSX1Q9NZR4 365 aaPredicted RBP11.81□□□□□ -0.52
CDC27-209ENST00000532893 AURKCQ9UQB9 309 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 SNX13Q9Y5W8 968 aa11.81□□□□□ -0.52
CDC27-209ENST00000532893 A0A087WUU8 490 aa11.8□□□□□ -0.52
CDC27-209ENST00000532893 H3BUX3 64 aa11.8□□□□□ -0.52
CDC27-209ENST00000532893 SOCS2O14508 198 aa11.8□□□□□ -0.52
CDC27-209ENST00000532893 LHBP01229 141 aa11.8□□□□□ -0.52
CDC27-209ENST00000532893 SDHAP31040 664 aa11.8□□□□□ -0.52
CDC27-209ENST00000532893 SAA4P35542 130 aa11.8□□□□□ -0.52
CDC27-209ENST00000532893 CDKN2AP42771 156 aaKnown RBP11.8□□□□□ -0.52
CDC27-209ENST00000532893 CYLC2Q14093 348 aaPredicted RBP11.8□□□□□ -0.52
CDC27-209ENST00000532893 LY6EQ16553 131 aa11.8□□□□□ -0.52
CDC27-209ENST00000532893 FOXB2Q5VYV0 432 aa11.8□□□□□ -0.52
CDC27-209ENST00000532893 TEX36Q5VZQ5 186 aa11.8□□□□□ -0.52
CDC27-209ENST00000532893 GPR139Q6DWJ6 353 aa11.8□□□□□ -0.52
CDC27-209ENST00000532893 C11orf88Q6PI97 169 aa11.8□□□□□ -0.52
CDC27-209ENST00000532893 CFAP77Q6ZQR2 320 aa11.8□□□□□ -0.52
CDC27-209ENST00000532893 LINC00346Q8IVM7 164 aa11.8□□□□□ -0.52
CDC27-209ENST00000532893 RNF113BQ8IZP6 322 aaKnown RBP11.8□□□□□ -0.52
CDC27-209ENST00000532893 OR4S1Q8NGB4 309 aa11.8□□□□□ -0.52
CDC27-209ENST00000532893 OR4C13Q8NGP0 309 aa11.8□□□□□ -0.52
CDC27-209ENST00000532893 OR2T6Q8NHC8 308 aa11.8□□□□□ -0.52
CDC27-209ENST00000532893 ACOT11Q8WXI4 607 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms