RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 KIF18AQ8NI77 898 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 AGR3Q8TD06 166 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 UBLCP1Q8WVY7 318 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-213ENST00000530784 ZNF75CPQ92670 426 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-213ENST00000530784 APH1AQ96BI3 265 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 TNFRSF13CQ96RJ3 184 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 DHRS9Q9BPW9 319 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 RHOXF2Q9BQY4 288 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 C1orf50Q9BV19 199 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 THUMPD3Q9BV44 507 aaKnown RBP5.56□□□□□ -1.52
CSDE1-213ENST00000530784 NMUR2Q9GZQ4 415 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 FN3KQ9H479 309 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 MED20Q9H944 212 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 EML4Q9HC35 981 aaKnown RBP5.56□□□□□ -1.52
CSDE1-213ENST00000530784 TAS2R16Q9NYV7 291 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 GIMAP2Q9UG22 337 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 NOSIPQ9Y314 301 aaKnown RBP5.56□□□□□ -1.52
CSDE1-213ENST00000530784 A0A096LNT2 108 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 TRBV5-5A0A0J9YX44 114 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 RNF103-CHMP3A0A140T963 221 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 ZNF716A6NP11 495 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 E7EQL1 145 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 GPR171O14626 319 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 FCMRO60667 390 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 STX11O75558 287 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 UGT2B17O75795 530 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 KRT33AO76009 404 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 IGHV3-9P01782 118 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 QDPRP09417 244 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 CSF3P09919 207 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 UBTFL6P0CB48 400 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-213ENST00000530784 RPL35AP18077 110 aaKnown RBP5.55□□□□□ -1.52
CSDE1-213ENST00000530784 ALDH3A1P30838 453 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 FABP6P51161 128 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 CASP9P55211 416 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 HBA1P69905 142 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 MS4A2Q01362 244 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 LOXL1Q08397 574 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-213ENST00000530784 PDK3Q15120 406 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 RAB35Q15286 201 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 ZNF141Q15928 474 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 C6orf136Q5SQH8 315 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 ATAD3BQ5T9A4 648 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 IL23RQ5VWK5 629 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 C11orf71Q6IPW1 123 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 ZNF544Q6NX49 715 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 B3GLCTQ6Y288 498 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 EIF3MQ7L2H7 374 aaKnown RBP5.55□□□□□ -1.52
CSDE1-213ENST00000530784 C16orf62Q7Z3J2 963 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 KRTCAP2Q8N6L1 136 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 ZNF525Q8N782 197 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 ZNF563Q8TA94 476 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 PIGXQ8TBF5 258 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 SLC35G5Q96KT7 338 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 SDF2Q99470 211 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 INPP5KQ9BT40 448 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 BEX2Q9BXY8 128 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 ZNF350Q9GZX5 532 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 DNAJC4Q9NNZ3 241 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 ACER3Q9NUN7 267 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 EXD2Q9NVH0 621 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 CHRNA9Q9UGM1 479 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 SLC25A15Q9Y619 301 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 DSCAMO60469 2012 aa5.55□□□□□ -1.52
CSDE1-213ENST00000530784 JMJD1CQ15652 2540 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 ZANQ9Y493 2812 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 IGHV3OR16-10A0A075B7F0 116 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 H0YAE9 185 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 KIAA0513O60268 411 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 MRPL33O75394 65 aaKnown RBP5.54□□□□□ -1.52
CSDE1-213ENST00000530784 SLU7O95391 586 aaKnown RBP5.54□□□□□ -1.52
CSDE1-213ENST00000530784 AZGP1P25311 298 aaKnown RBP5.54□□□□□ -1.52
CSDE1-213ENST00000530784 FKBP2P26885 142 aaKnown RBP5.54□□□□□ -1.52
CSDE1-213ENST00000530784 SERPINB5P36952 375 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 MAGEA8P43361 318 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 EFNA4P52798 201 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 TMEM50BP56557 158 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 HPCAP84074 193 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 CHRNB3Q05901 458 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 TRAP1Q12931 704 aaKnown RBP5.54□□□□□ -1.52
CSDE1-213ENST00000530784 ZNF273Q14593 569 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 GABRA6Q16445 453 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 ARHGAP11BQ3KRB8 267 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 CYB5R2Q6BCY4 276 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 CASP12Q6UXS9 341 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 ZCCHC23Q6ZST2 131 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 IL17RELQ6ZVW7 336 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 OLIG3Q7RTU3 272 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 GRINAQ7Z429 371 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 C6orf120Q7Z4R8 191 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 RIMKLAQ8IXN7 391 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 CLECL1Q8IZS7 167 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 CLEC4FQ8N1N0 589 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 C17orf78Q8N4C9 275 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 AQP11Q8NBQ7 271 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 FAM71CQ8NEG0 241 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 C10orf105Q8TEF2 133 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 TUBGCP3Q96CW5 907 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 DNAJA3Q96EY1 480 aa5.54□□□□□ -1.52
CSDE1-213ENST00000530784 OR51I1Q9H343 314 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms