RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 RPS4XP62701 263 aaKnown RBP11.07□□□□□ -0.64
SCN3B-206ENST00000530277 MRPL21Q7Z2W9 205 aaKnown RBP11.07□□□□□ -0.64
SCN3B-206ENST00000530277 ZC3H10Q96K80 434 aaKnown RBP11.07□□□□□ -0.64
SCN3B-206ENST00000530277 CCNL2Q96S94 520 aaPredicted RBP11.07□□□□□ -0.64
SCN3B-206ENST00000530277 NTMQ9P121 344 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 CSAG2Q9Y5P2 127 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 CDK2AP1O14519 115 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 EFSO43281 561 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 DIRAS3O95661 229 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 PTBP1P26599 531 aaKnown RBP eCLIP11.07□□□□□ -0.64
SCN3B-206ENST00000530277 AKR1C3P42330 323 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 SKP2Q13309 424 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 LGALSLQ3ZCW2 172 aaPredicted RBP11.07□□□□□ -0.64
SCN3B-206ENST00000530277 CLEC9AQ6UXN8 241 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 KCNG3Q8TAE7 436 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 PHYHIPQ92561 330 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.07□□□□□ -0.64
SCN3B-206ENST00000530277 TAS2R5Q9NYW4 299 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 ZNF254O75437 659 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 CFDP00746 253 aaPredicted RBP11.07□□□□□ -0.64
SCN3B-206ENST00000530277 CCL4P13236 92 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 CARD18P57730 90 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 SLC25A30Q5SVS4 291 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 FAM122CQ6P4D5 195 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 ADGRG3Q86Y34 549 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 LSMEM1Q8N8F7 131 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 MS4A3Q96HJ5 214 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 SUCNR1Q9BXA5 334 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 S1PR5Q9H228 398 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 OR14J1Q9UGF5 321 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 RAB22AQ9UL26 194 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 R4GMQ9 66 aa11.07□□□□□ -0.64
SCN3B-206ENST00000530277 XRCC2O43543 280 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 CCL2P13500 99 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 TUBG1P23258 451 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 GNMTQ14749 295 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 HLA-BQ31612 363 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 PLA1AQ53H76 456 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 SEZ6L2Q6UXD5 910 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 C9orf62Q8N4C0 152 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 CNEP1R1Q8N9A8 125 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 IFI44Q8TCB0 444 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 C2CD4CQ8TF44 421 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 KISS1RQ969F8 398 aaPredicted RBP11.06□□□□□ -0.64
SCN3B-206ENST00000530277 DUSP23Q9BVJ7 150 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 CNTD2Q9H8S5 307 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 PCOLCE2Q9UKZ9 415 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 ABCA1O95477 2261 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 CHD7Q9P2D1 2997 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 OGG1O15527 345 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 SULT1B1O43704 296 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 MRPL33O75394 65 aaKnown RBP11.06□□□□□ -0.64
SCN3B-206ENST00000530277 EGR3Q06889 387 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 GLDNQ6ZMI3 551 aaPredicted RBP11.06□□□□□ -0.64
SCN3B-206ENST00000530277 TMEM200AQ86VY9 491 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 OR5AS1Q8N127 324 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 SLC39A7Q92504 469 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 NAT6Q93015 286 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 ZNF764Q96H86 408 aaPredicted RBP11.06□□□□□ -0.64
SCN3B-206ENST00000530277 CXorf58Q96LI9 332 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 ZNF75AQ96N20 296 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 ZNF407Q9C0G0 2248 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 A0A1B0GUH1 482 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 TRIM64BA6NI03 449 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 ZNF354AO60765 605 aaPredicted RBP11.06□□□□□ -0.64
SCN3B-206ENST00000530277 TSPAN15O95858 294 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 SNRNP70P08621 437 aaKnown RBP11.06□□□□□ -0.64
SCN3B-206ENST00000530277 CD53P19397 219 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 EIF5AP63241 154 aaKnown RBP11.06□□□□□ -0.64
SCN3B-206ENST00000530277 GPR157Q5UAW9 335 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 STK35Q8TDR2 534 aa11.06□□□□□ -0.64
SCN3B-206ENST00000530277 AKIRIN1Q9H9L7 192 aaPredicted RBP11.06□□□□□ -0.64
SCN3B-206ENST00000530277 OR5H15A6NDH6 313 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 ADAP1O75689 374 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 GIPP09681 153 aaPredicted RBP11.05□□□□□ -0.64
SCN3B-206ENST00000530277 LINC00271P0C7V0 271 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 UBBP0CG47 229 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 APOBEC1P41238 236 aaKnown RBP11.05□□□□□ -0.64
SCN3B-206ENST00000530277 MGAT2Q10469 447 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 FUT7Q11130 342 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 RBM39Q14498 530 aaKnown RBP11.05□□□□□ -0.64
SCN3B-206ENST00000530277 PCK2Q16822 640 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 TIGD3Q6B0B8 471 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 SMRP1Q8NCR6 262 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 VOPP1Q96AW1 172 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 HINT2Q9BX68 163 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 ZNF768Q9H5H4 540 aaKnown RBP11.05□□□□□ -0.64
SCN3B-206ENST00000530277 RPS10P5Q9NQ39 176 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 MRPS18AQ9NVS2 196 aaKnown RBP11.05□□□□□ -0.64
SCN3B-206ENST00000530277 OCIAD1Q9NX40 245 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 SH3BGRL2Q9UJC5 107 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 PADI1Q9ULC6 663 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 LILRA5A6NI73 299 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 ALG1L2C9J202 215 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 M0R135 149 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 NDUFB6O95139 128 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 PMS2P2O95744 297 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 IGF2P01344 180 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 HLA-DQB1P01920 261 aa11.05□□□□□ -0.64
SCN3B-206ENST00000530277 NAGAP17050 411 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms