RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 C1orf123Q9NWV4 160 aa9.43□□□□□ -0.9
AMBRA1-207ENST00000529553 NKX1-2Q9UD57 310 aaPredicted RBP9.43□□□□□ -0.9
AMBRA1-207ENST00000529553 RER1O15258 196 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 CHST1O43916 411 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 CLIC3O95833 236 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 CA6P23280 308 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 TGM4P49221 684 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 HIST1H3AP68431 136 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 PRB3Q04118 309 aaPredicted RBP9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 BLMHQ13867 455 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 KCNMB1Q16558 191 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 RSPO1Q2MKA7 263 aaPredicted RBP9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 ATPAF1Q5TC12 328 aaPredicted RBP9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 HIST2H3PS2Q5TEC6 136 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 HIST2H3AQ71DI3 136 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 PGAP1Q75T13 922 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 PATL1Q86TB9 770 aaKnown RBP9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 LRRC75AQ8NAA5 344 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 SDR9C7Q8NEX9 313 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 GJC3Q8NFK1 279 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 OR5D13Q8NGL4 314 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 OR9I1Q8NGQ6 314 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 TMEM255BQ8WV15 326 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 RASSF5Q8WWW0 418 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 RORBQ92753 470 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 C12orf43Q96C57 262 aaKnown RBP9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 CCL13Q99616 98 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 NKX3-1Q99801 234 aaPredicted RBP9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 HDHD2Q9H0R4 259 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 WDR76Q9H967 626 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 RNPEPL1Q9HAU8 725 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 VAPAQ9P0L0 249 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 SLAMF8Q9P0V8 285 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 DNAJB11Q9UBS4 358 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 MED31Q9Y3C7 131 aa9.42□□□□□ -0.9
AMBRA1-207ENST00000529553 TRBV5-3A0A0A0MS03 114 aa9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 TEX13CA0A0J9YWL9 993 aa9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 OR5F1O95221 314 aa9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 ALDOBP05062 364 aa9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 HOXD3P31249 432 aaPredicted RBP9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 MRPL19P49406 292 aaKnown RBP9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 HABP2Q14520 560 aaPredicted RBP9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 KRTAP27-1Q3LI81 207 aa9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 LRRC10Q5BKY1 277 aa9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 GLB1L2Q8IW92 636 aa9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 AENQ8WTP8 325 aaKnown RBP9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 C17orf50Q8WW18 174 aa9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 SLCO4A1Q96BD0 722 aa9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 MAP6Q96JE9 813 aa9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 SSU72Q9NP77 194 aaKnown RBP9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 INPP5EQ9NRR6 644 aa9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 C14orf119Q9NWQ9 140 aa9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 MRPL15Q9P015 296 aaKnown RBP9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 RIMS3Q9UJD0 308 aa9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 TSSC4Q9Y5U2 329 aaPredicted RBP9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 DNAH7Q8WXX0 4024 aa9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 STAB2Q8WWQ8 2551 aa9.41□□□□□ -0.9
AMBRA1-207ENST00000529553 A0A1W2PRX2 142 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 PRSS37A4D1T9 235 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 CD300LBA8K4G0 201 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 VGLL3A8MV65 326 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 F2RL2O00254 374 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 XKRYO14609 159 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 GRK5P34947 590 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 GSK3BP49841 420 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 BMXP51813 675 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 DLX1P56177 255 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 POU4F2Q12837 409 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 ECH1Q13011 328 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 CNN3Q15417 329 aaKnown RBP9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 RABL3Q5HYI8 236 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 WDR38Q5JTN6 314 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 HCP5Q6MZN7 132 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 PGM2L1Q6PCE3 622 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 UNQ9370/PRO34162Q6UXP9 181 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 FGFRL1Q8N441 504 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 FAM156AQ8NDB6 213 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 OR5AU1Q8NGC0 362 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 BPIFA2Q96DR5 249 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 ADAT1Q9BUB4 502 aaKnown RBP9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 MCRIP2Q9BUT9 160 aaKnown RBP9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 CHID1Q9BWS9 393 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 DNTTIP1Q9H147 329 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 IKZF5Q9H5V7 419 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 GRHPRQ9UBQ7 328 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 PITPNC1Q9UKF7 332 aa9.4□□□□□ -0.9
AMBRA1-207ENST00000529553 LYSTQ99698 3801 aa9.4□□□□□ -0.91
AMBRA1-207ENST00000529553 IGHV3OR15-7A0A075B7D8 119 aa9.39□□□□□ -0.91
AMBRA1-207ENST00000529553 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.39□□□□□ -0.91
AMBRA1-207ENST00000529553 A0A1B0GW55 424 aa9.39□□□□□ -0.91
AMBRA1-207ENST00000529553 KHDRBS3O75525 346 aaKnown RBP9.39□□□□□ -0.91
AMBRA1-207ENST00000529553 GLCEO94923 617 aa9.39□□□□□ -0.91
AMBRA1-207ENST00000529553 GRPP07492 148 aa9.39□□□□□ -0.91
AMBRA1-207ENST00000529553 ACSM4P0C7M7 580 aa9.39□□□□□ -0.91
AMBRA1-207ENST00000529553 DUX4L2P0CJ85 424 aa9.39□□□□□ -0.91
AMBRA1-207ENST00000529553 DUX4L3P0CJ86 424 aa9.39□□□□□ -0.91
AMBRA1-207ENST00000529553 DUX4L4P0CJ87 422 aa9.39□□□□□ -0.91
AMBRA1-207ENST00000529553 DUX4L5P0CJ88 424 aa9.39□□□□□ -0.91
AMBRA1-207ENST00000529553 DUX4L6P0CJ89 424 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms