RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 FGD2Q7Z6J4 655 aa12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 ZFP62Q8NB50 900 aaPredicted RBP12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 TMEM178AQ8NBL3 297 aa12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 DEFB124Q8NES8 71 aa12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 OR14K1Q8NGZ2 314 aa12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 ZNF486Q96H40 463 aaPredicted RBP12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 GHITMQ9H3K2 345 aa12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 CRLF2Q9HC73 371 aa12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 CGGBP1Q9UFW8 167 aaPredicted RBP12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 RHBDD3Q9Y3P4 386 aa12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 V9GYS6 101 aa12.99□□□□□ -0.33
ECHDC1-220ENST00000528402 M0R135 149 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 SGCEO43556 437 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 PEX14O75381 377 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 MRPL33O75394 65 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 DHRS3O75911 302 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 LPLP06858 475 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 AKAIN1P0CW23 69 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 TMIGD3P0DMS9 266 aaPredicted RBP12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 LIPCP11150 499 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 PRF1P14222 555 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 STOMP27105 288 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 ERP29P30040 261 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 EFNB2P52799 333 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 CLDN18P56856 261 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 SLC10A1Q14973 349 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 RNPS1Q15287 305 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 UTS2BQ765I0 119 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 NOXA1Q86UR1 476 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 LRRC18Q8N456 261 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 TMEM251Q8N6I4 163 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 GPX8Q8TED1 209 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 ZNF799Q96GE5 643 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 FOXB1Q99853 325 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 CNTD2Q9H8S5 307 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 GPR35Q9HC97 309 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 PLA2G3Q9NZ20 509 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 ATPIF1Q9UII2 106 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 NOSIPQ9Y314 301 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 AHCTF1Q8WYP5 2266 aa12.98□□□□□ -0.33
ECHDC1-220ENST00000528402 TRAV6A0A075B6T7 132 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 A0A0A6YYJ9 748 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 F5H5K5 113 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 RPL36A-HNRNPH2H7BZ11 118 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 TGM6O95932 706 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 ZNF24P17028 368 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 MEOX1P50221 254 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 MECP2P51608 486 aaKnown RBP12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 TAS2R19P59542 299 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 GSG1Q2KHT4 349 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 PCGF3Q3KNV8 242 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 METTL11BQ5VVY1 283 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 CHMP1BQ7LBR1 199 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 FAM109AQ8N4B1 249 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 PNLDC1Q8NA58 520 aaKnown RBP12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 TMEM229BQ8NBD8 167 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 OR52N4Q8NGI2 321 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 OR4D6Q8NGJ1 314 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 OR1F12Q8NHA8 337 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 KCNG3Q8TAE7 436 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 FBXO17Q96EF6 278 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 OR51J1Q9H342 316 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 RGCCQ9H4X1 137 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 MCUBQ9NWR8 336 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 PTTG3PQ9NZH4 202 aa12.97□□□□□ -0.33
ECHDC1-220ENST00000528402 OR6C6A6NF89 314 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 SYNGR3O43761 229 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 DOK2O60496 412 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 LMX1BO60663 402 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 F10P00742 488 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 C1QBP02746 253 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 IL5P05113 134 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 MELTFP08582 738 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 CRYGSP22914 178 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 RCVRNP35243 200 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 SLC6A9P48067 706 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 CCR6P51684 374 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 PPIAP62937 165 aaKnown RBP12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 PMPCAQ10713 525 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 PLA2G7Q13093 441 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 CEACAM16Q2WEN9 425 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 KRTAP27-1Q3LI81 207 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 ZNF627Q7L945 461 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 GALNTL5Q7Z4T8 443 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 ANGPTL5Q86XS5 388 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 OR13C9Q8NGT0 318 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 CPNE2Q96FN4 548 aaPredicted RBP12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 FAM71F1Q96KD3 344 aaPredicted RBP12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 C20orf85Q9H1P6 137 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 BCO1Q9HAY6 547 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 GPN1Q9HCN4 374 aaPredicted RBP12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 GP6Q9HCN6 339 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 RANGRFQ9HD47 186 aaPredicted RBP12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 ZNF319Q9P2F9 582 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 COL6A3P12111 3177 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 WDR87Q6ZQQ6 2873 aa12.96□□□□□ -0.33
ECHDC1-220ENST00000528402 ZNF318Q5VUA4 2279 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 A0A1B0GUH1 482 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 ARGFXA6NJG6 315 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 TMEM14DPA8MWL7 114 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms