RNA–Protein interactions for RNA: ENST00000528320.5

PUF60-212, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-212ENST00000528320 CCR9P51686 369 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 LSM3P62310 102 aaKnown RBP13.13□□□□□ -0.31
PUF60-212ENST00000528320 LCN6P62502 163 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 RUNX1T1Q06455 604 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 DOC2BQ14184 412 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 ZNF829Q3KNS6 432 aaPredicted RBP13.13□□□□□ -0.31
PUF60-212ENST00000528320 C3orf36Q3SXR2 165 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 TBRG1Q3YBR2 411 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 HIKESHIQ53FT3 197 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 YIF1BQ5BJH7 314 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 PHYHD1Q5SRE7 291 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 C9orf135Q5VTT2 229 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 C11orf71Q6IPW1 123 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 SLC25A47Q6Q0C1 308 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 ABHD12BQ7Z5M8 362 aaPredicted RBP13.13□□□□□ -0.31
PUF60-212ENST00000528320 C20orf196Q8IYI0 205 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 ZNF511Q8NB15 262 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 NANOS1Q8WY41 292 aaKnown RBP13.13□□□□□ -0.31
PUF60-212ENST00000528320 TXNDC15Q96J42 360 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 PGLYRP3Q96LB9 341 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 OR8B4Q96RC9 309 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 TRAF4Q9BUZ4 470 aaPredicted RBP13.13□□□□□ -0.31
PUF60-212ENST00000528320 MROQ9BYG7 248 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 NIPAL2Q9H841 368 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 GPR35Q9HC97 309 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 MED29Q9NX70 200 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 CISD1Q9NZ45 108 aaKnown RBP13.13□□□□□ -0.31
PUF60-212ENST00000528320 GNG8Q9UK08 70 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 COPS3Q9UNS2 423 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 CUBNO60494 3623 aa13.13□□□□□ -0.31
PUF60-212ENST00000528320 IQCMA0A1B0GVH7 501 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 SLC35F4A4IF30 521 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 TMEM212A6NML5 194 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 ZNF587BE7ETH6 402 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 ZNF593O00488 134 aaPredicted RBP13.12□□□□□ -0.31
PUF60-212ENST00000528320 GABRPO00591 440 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 ARL6IP5O75915 188 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 HLA-DQA2P01906 255 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 MAPK3P27361 379 aaPredicted RBP13.12□□□□□ -0.31
PUF60-212ENST00000528320 CDKN1AP38936 164 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 GUCA1AP43080 201 aaPredicted RBP13.12□□□□□ -0.31
PUF60-212ENST00000528320 ZNF83P51522 516 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 LSM6P62312 80 aaKnown RBP13.12□□□□□ -0.31
PUF60-212ENST00000528320 RPS25P62851 125 aaKnown RBP13.12□□□□□ -0.31
PUF60-212ENST00000528320 SPOCK1Q08629 439 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 ANKRD16Q6P6B7 361 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 FOXL2NBQ6ZUU3 175 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 SSX6Q7RTT6 188 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 DPY19L4Q7Z388 723 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 OR10H5Q8NGA6 315 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 MCFD2Q8NI22 146 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 TMEM54Q969K7 222 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 SLC25A46Q96AG3 418 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 ALKBH3Q96Q83 286 aaPredicted RBP13.12□□□□□ -0.31
PUF60-212ENST00000528320 MRPL22Q9NWU5 206 aaKnown RBP13.12□□□□□ -0.31
PUF60-212ENST00000528320 CR1P17927 2039 aa13.12□□□□□ -0.31
PUF60-212ENST00000528320 NBEAL1Q6ZS30 2694 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 TRAV1-2A0A0B4J238 106 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 PNMA8CA0A1B0GUJ8 204 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 ZNF503-AS2A6NEH8 195 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 IGKV3-15P01624 115 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 IGHV4-39P01824 125 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 S100A5P33763 92 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 CSNK1A1P48729 337 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 ARF1P84077 181 aaKnown RBP13.11□□□□□ -0.31
PUF60-212ENST00000528320 FABP5Q01469 135 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 DCTN2Q13561 401 aaKnown RBP13.11□□□□□ -0.31
PUF60-212ENST00000528320 NRN1LQ496H8 165 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 TP53I3Q53FA7 332 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 OR6Q1Q8NGQ2 317 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 BORCS5Q969J3 196 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 KCTD12Q96CX2 325 aaKnown RBP13.11□□□□□ -0.31
PUF60-212ENST00000528320 ZNF75AQ96N20 296 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 DHRS9Q9BPW9 319 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 PLGRKTQ9HBL7 147 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 B3GAT2Q9NPZ5 323 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 YAE1D1Q9NRH1 226 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 B3GNT2Q9NY97 397 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 GLTPQ9NZD2 209 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 COA3Q9Y2R0 106 aaPredicted RBP13.11□□□□□ -0.31
PUF60-212ENST00000528320 ZNF281Q9Y2X9 895 aa13.11□□□□□ -0.31
PUF60-212ENST00000528320 IGHV1-18A0A0C4DH31 117 aa13.1□□□□□ -0.31
PUF60-212ENST00000528320 TRBV2A0A0J9YWF9 115 aa13.1□□□□□ -0.31
PUF60-212ENST00000528320 ZNF879B4DU55 563 aa13.1□□□□□ -0.31
PUF60-212ENST00000528320 CLDN25C9JDP6 229 aa13.1□□□□□ -0.31
PUF60-212ENST00000528320 SLC43A1O75387 559 aa13.1□□□□□ -0.31
PUF60-212ENST00000528320 MYL9P24844 172 aa13.1□□□□□ -0.31
PUF60-212ENST00000528320 ETV6P41212 452 aa13.1□□□□□ -0.31
PUF60-212ENST00000528320 GDI2P50395 445 aaKnown RBP13.1□□□□□ -0.31
PUF60-212ENST00000528320 RIDAP52758 137 aaKnown RBP13.1□□□□□ -0.31
PUF60-212ENST00000528320 ALKBH1Q13686 389 aaKnown RBP13.1□□□□□ -0.31
PUF60-212ENST00000528320 ZNF846Q147U1 533 aa13.1□□□□□ -0.31
PUF60-212ENST00000528320 ARL9Q6T311 187 aa13.1□□□□□ -0.31
PUF60-212ENST00000528320 YIPF7Q8N8F6 280 aa13.1□□□□□ -0.31
PUF60-212ENST00000528320 ACOT12Q8WYK0 555 aa13.1□□□□□ -0.31
PUF60-212ENST00000528320 TMEM158Q8WZ71 300 aa13.1□□□□□ -0.31
PUF60-212ENST00000528320 EMC6Q9BV81 110 aa13.1□□□□□ -0.31
PUF60-212ENST00000528320 CDADC1Q9BWV3 514 aa13.1□□□□□ -0.31
PUF60-212ENST00000528320 C1QTNF6Q9BXI9 259 aa13.1□□□□□ -0.31
PUF60-212ENST00000528320 COMMD4Q9H0A8 199 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms