RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 ANKRD36A6QL64 1941 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 EPXP11678 715 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 COX6A1P12074 109 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 DDOSTP39656 456 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 OR8B8Q15620 311 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 C2orf76Q3KRA6 126 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 ZDHHC23Q8IYP9 409 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 ZNF709Q8N972 641 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 SCPEP1Q9HB40 452 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 ZNF224Q9NZL3 707 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 KCNE5Q9UJ90 142 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 ZNF391Q9UJN7 358 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 MAB21L2Q9Y586 359 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 F5H5P2 479 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 LRP3O75074 770 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 EDN3P14138 238 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 ERVK-16P61578 105 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 EIF2S3LQ2VIR3 472 aaKnown RBP13.44□□□□□ -0.26
USP47-207ENST00000527733 PRSS45Q7RTY3 260 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 LSRQ86X29 649 aaPredicted RBP13.44□□□□□ -0.26
USP47-207ENST00000527733 UFSP2Q9NUQ7 469 aa13.44□□□□□ -0.26
USP47-207ENST00000527733 DEGS1O15121 323 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 HLA-AP01891 365 aaKnown RBP13.43□□□□□ -0.26
USP47-207ENST00000527733 THBS4P35443 961 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 ARSJQ5FYB0 599 aaPredicted RBP13.43□□□□□ -0.26
USP47-207ENST00000527733 PLXDC2Q6UX71 529 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 BEST4Q8NFU0 473 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 FLVCR1-AS1Q8TAF5 88 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 IL17BQ9UHF5 180 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 PTP4A3O75365 173 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 MPZL1O95297 269 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 EVX1P49640 407 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 MECP2P51608 486 aaKnown RBP13.43□□□□□ -0.26
USP47-207ENST00000527733 PABPC1L2AQ5JQF8 200 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 OR1J1Q8NGS3 322 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 SCGB1C1Q8TD33 95 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 ABHD5Q8WTS1 349 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 C11orf54Q9H0W9 315 aaPredicted RBP13.43□□□□□ -0.26
USP47-207ENST00000527733 BOLA2-SMG1P6H3BVE0 249 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 HLA-HP01893 362 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 BMP5P22003 454 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 TAS2R20P59543 309 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 ZNF774Q6NX45 483 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 MAMSTRQ6ZN01 415 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 LYSMD2Q8IV50 215 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 BOD1Q96IK1 185 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 B3GNT2Q9NY97 397 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 GHRLQ9UBU3 117 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 FOXJ3Q9UPW0 622 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 SEMG1P04279 462 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 LPLP06858 475 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 RPS4Y1P22090 263 aaKnown RBP13.43□□□□□ -0.26
USP47-207ENST00000527733 CPEB3Q8NE35 698 aaKnown RBP13.43□□□□□ -0.26
USP47-207ENST00000527733 PAQR8Q8TEZ7 354 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 UCN2Q96RP3 112 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 TTTY12Q9BZ98 90 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 SLC26A1Q9H2B4 701 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 TSC2P49815 1807 aa13.43□□□□□ -0.26
USP47-207ENST00000527733 HMX3A6NHT5 357 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 ZNF770Q6IQ21 691 aaPredicted RBP13.42□□□□□ -0.26
USP47-207ENST00000527733 DOK1Q99704 481 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 ACKR4Q9NPB9 350 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 SLC17A2O00624 439 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 AQP8O94778 261 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 PRKACAP17612 351 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 LSM6P62312 80 aaKnown RBP13.42□□□□□ -0.26
USP47-207ENST00000527733 SNX18Q96RF0 628 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 PTPRDP23468 1912 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 IGKV3D-11A0A0A0MRZ8 115 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 PRR33A8MZF0 331 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 IFNA5P01569 189 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 TCRBP04435 133 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 CEBPGP53567 150 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 SSX1Q16384 188 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 DERL3Q96Q80 235 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 SLC25A21Q9BQT8 299 aaPredicted RBP13.42□□□□□ -0.26
USP47-207ENST00000527733 OR2B2Q9GZK3 357 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 ADAM19Q9H013 955 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 SCN2AQ99250 2005 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 ALPK2Q86TB3 2170 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 TMIGD3P0DMS9 266 aaPredicted RBP13.42□□□□□ -0.26
USP47-207ENST00000527733 EDDM3BP56851 147 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 C3AR1Q16581 482 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 LPCAT3Q6P1A2 487 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 SLC25A26Q70HW3 274 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 TSEN54Q7Z6J9 526 aaKnown RBP13.42□□□□□ -0.26
USP47-207ENST00000527733 TUSC5Q8IXB3 177 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 CMTM4Q8IZR5 234 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 DVL3Q92997 716 aaPredicted RBP13.42□□□□□ -0.26
USP47-207ENST00000527733 ZNF285Q96NJ3 590 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 WFDC6Q9BQY6 131 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 TMEM246Q9BRR3 403 aa13.42□□□□□ -0.26
USP47-207ENST00000527733 MTCL1Q9Y4B5 1905 aaKnown RBP13.41□□□□□ -0.26
USP47-207ENST00000527733 NKX6-3A6NJ46 265 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 M0QYG6 137 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 PCMT1P22061 227 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 CRYBB2P43320 205 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 SELENOPP49908 381 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 RGS7BPQ6MZT1 257 aaPredicted RBP13.41□□□□□ -0.26
USP47-207ENST00000527733 PPP1R32Q7Z5V6 425 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms