RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 C22orf46C9J442 243 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 NPIPB4C9JG80 1138 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 C3orf80F5H4A9 247 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 H0YHG0 523 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 CLDN34H7C241 214 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 M0QZ24 198 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 MLNRO43193 412 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 FAM20BO75063 409 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 E2F6O75461 281 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 CCNB2O95067 398 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 TSPAN15O95858 294 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 IGHV4-59P01825 116 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 MELTFP08582 738 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 ANXA8P13928 327 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 IRF2P14316 349 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 RAC2P15153 192 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 CTLA4P16410 223 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 FPR3P25089 353 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 GPR4P46093 362 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 SRP9P49458 86 aaKnown RBP5.47□□□□□ -1.53
CD44-221ENST00000526000 DLX1P56177 255 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 ELF3P78545 371 aaPredicted RBP5.47□□□□□ -1.53
CD44-221ENST00000526000 SCRN3Q0VDG4 424 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 RIPK1Q13546 671 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 MPPED2Q15777 294 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 MICAQ29983 383 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 FGD3Q5JSP0 725 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 GPR157Q5UAW9 335 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 RPL13AP3Q6NVV1 102 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 CD300LDQ6UXZ3 194 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 Q6YL49 198 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 TMPRSS11FQ6ZWK6 438 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 MUC20Q8N307 709 aaPredicted RBP5.47□□□□□ -1.53
CD44-221ENST00000526000 FGFRL1Q8N441 504 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 C11orf44Q8N8P7 122 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 OR4C15Q8NGM1 316 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 OR13G1Q8NGZ3 307 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 OR1F12Q8NHA8 337 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 OR5K1Q8NHB7 308 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 LHX4Q969G2 390 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 SLCO4A1Q96BD0 722 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 TSSK2Q96PF2 358 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 SLC30A2Q9BRI3 323 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 FUZQ9BT04 418 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 DGCR6LQ9BY27 220 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 DCLRE1BQ9H816 532 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 TCF7L1Q9HCS4 588 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 SRA1Q9HD15 236 aaKnown RBP5.47□□□□□ -1.53
CD44-221ENST00000526000 TMEM100Q9NV29 134 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 ASH2LQ9UBL3 628 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 CGGBP1Q9UFW8 167 aaPredicted RBP5.47□□□□□ -1.53
CD44-221ENST00000526000 LRCH1Q9Y2L9 728 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 HIF3AQ9Y2N7 669 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 POLR1DQ9Y2S0 133 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 MMP24Q9Y5R2 645 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 IER3IP1Q9Y5U9 82 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 PKD1L1Q8TDX9 2849 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 TRRAPQ9Y4A5 3859 aa5.47□□□□□ -1.53
CD44-221ENST00000526000 IGHV3OR15-7A0A075B7D8 119 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 TEX13CA0A0J9YWL9 993 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 A0A0U1RQK1 487 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 A6NIZ1 184 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 LRRC30A6NM36 301 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 F5H5K5 113 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 H3BSA7 217 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 SOCS2O14508 198 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 XKRYO14609 159 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 CDC42EP2O14613 210 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 TIMM23O14925 209 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 ADAM20O43506 726 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 OR10H3O60404 316 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 GPR137BO60478 399 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 KHDRBS3O75525 346 aaKnown RBP5.46□□□□□ -1.54
CD44-221ENST00000526000 TOX4O94842 621 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 GYPAP02724 150 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 GRPP07492 148 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 TSPAN19P0C672 248 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 COX5BP10606 129 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 NR2C1P13056 603 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 ZNF26P17031 533 aaPredicted RBP5.46□□□□□ -1.54
CD44-221ENST00000526000 RAP1BP61224 184 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 RAP1AP62834 184 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 TSPAN31Q12999 210 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 MAB21L1Q13394 359 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 FHL1Q13642 323 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 OR8B8Q15620 311 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 TAF9Q16594 264 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 RFX4Q33E94 735 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 ZNF404Q494X3 552 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 MESTQ5EB52 335 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 ZNF362Q5T0B9 420 aaPredicted RBP5.46□□□□□ -1.54
CD44-221ENST00000526000 ZNF841Q6ZN19 808 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 ZNF620Q6ZNG0 422 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 ZNF826PQ6ZT77 177 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 FOXL2NBQ6ZUU3 175 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 NLRC3Q7RTR2 1065 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 ZDHHC13Q8IUH4 622 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 LINC00346Q8IVM7 164 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 PQLC1Q8N2U9 271 aa5.46□□□□□ -1.54
CD44-221ENST00000526000 LNX2Q8N448 690 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms