RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 COLQQ9Y215 455 aaPredicted RBP14.66□□□□□ -0.06
PCDHA3-201ENST00000522353 TRGV10A0A0A0MS01 117 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 ALOX5APP20292 161 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 HCCSP53701 268 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 TAF9Q16594 264 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 Q6ZNX1 250 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 GPR119Q8TDV5 335 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 COX14Q96I36 57 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 NDUFB11Q9NX14 153 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 LAMP3Q9UQV4 416 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 ZIC2O95409 532 aaPredicted RBP14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 RPS2P15880 293 aaKnown RBP14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 CSN1S1P47710 185 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 ZNF121P58317 390 aaPredicted RBP14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 ERHP84090 104 aaKnown RBP14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 SSX2Q16385 188 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 PWWP2BQ6NUJ5 590 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 FJX1Q86VR8 437 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 LYSMD2Q8IV50 215 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 DUSP15Q9H1R2 295 aaPredicted RBP14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 ESRP2Q9H6T0 727 aaKnown RBP14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 EXOSC3Q9NQT5 275 aaKnown RBP14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 LIN7CQ9NUP9 197 aaKnown RBP14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 CRYBA1P05813 215 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 SFTPCP11686 197 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 TIGD3Q6B0B8 471 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 OR8G2PQ6IF36 304 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 WDR74Q6RFH5 385 aaPredicted RBP14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 VASH2Q86V25 355 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 OR51S1Q8NGJ8 323 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 HPP00738 406 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 CDK5R1Q15078 307 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 SOHLH1Q5JUK2 328 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 BHLHA9Q7RTU4 235 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 ZNF391Q9UJN7 358 aa14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 PUS1Q9Y606 427 aaKnown RBP eCLIP14.65□□□□□ -0.06
PCDHA3-201ENST00000522353 TMEM11P17152 192 aa14.65□□□□□ -0.07
PCDHA3-201ENST00000522353 Q8IYB0 196 aa14.65□□□□□ -0.07
PCDHA3-201ENST00000522353 SARGQ9BW04 601 aa14.65□□□□□ -0.07
PCDHA3-201ENST00000522353 RAB19A4D1S5 217 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 ALG1L2C9J202 215 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 AIPO00170 330 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 SPRY3O43610 288 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 IGFBP1P08833 259 aaPredicted RBP14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 RPS27P42677 84 aaKnown RBP14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 ZNF85Q03923 595 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 RAB35Q15286 201 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 LINC01555Q8NAE3 123 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 HSD17B11Q8NBQ5 300 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 ZNF2Q9BSG1 426 aaPredicted RBP14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 FLVCR1Q9Y5Y0 555 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 DUSP1P28562 367 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 PAQR6Q6TCH4 344 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 SP7Q8TDD2 431 aaPredicted RBP14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 CT55Q8WUE5 264 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 TXN2Q99757 166 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 IKZF5Q9H5V7 419 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 GNG13Q9P2W3 67 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 LAMB1P07942 1786 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 DUSP21Q9H596 190 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 ST3GAL6Q9Y274 331 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 CACNA1CQ13936 2221 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 SMIM18P0DKX4 95 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 MCCD1P59942 119 aaPredicted RBP14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 ANKRD34AQ69YU3 496 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 LILRB4Q8NHJ6 448 aa14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 MYOZ1Q9NP98 299 aaPredicted RBP14.64□□□□□ -0.07
PCDHA3-201ENST00000522353 MYO5AQ9Y4I1 1855 aaKnown RBP14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 ST8SIA5O15466 376 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 THBS4P35443 961 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 ZNF117Q03924 483 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 ZNF793Q6ZN11 406 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 CELF2-AS1Q8N7Q2 184 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 A4GNTQ9UNA3 340 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 SLC22A13Q9Y226 551 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 ADRA2CP18825 462 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 ZNF83P51522 516 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 AARDQ4LEZ3 155 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 TMPRSS7Q7RTY8 843 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 SLC7A5P1Q8MH63 180 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 C15orf54Q8N8G6 183 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 OR2G2Q8NGZ5 317 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 HMGCLL1Q8TB92 370 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 SEC22CQ9BRL7 303 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 TCFL5Q9UL49 500 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 PPP1R3CQ9UQK1 317 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 NUPL2O15504 423 aaKnown RBP14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 TRAPPC2P0DI81 140 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 TRAPPC2BP0DI82 140 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 APEHP13798 732 aaKnown RBP14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 GNG3P63215 75 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 DOCK1Q14185 1865 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 AGERQ15109 404 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 DRAM2Q6UX65 266 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 SPACA5Q96QH8 159 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 POFUT1Q9H488 388 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 MMP25Q9NPA2 562 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 SLCO1C1Q9NYB5 712 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 UBE2G2P60604 165 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 SNTB1Q13884 538 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms