RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 NSD1Q96L73 2696 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-215ENST00000519474 TVP23AA6NH52 213 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 AQP12BA6NM10 295 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 F5H5K5 113 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 H0YL77 283 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 ACSM4P0C7M7 580 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 PSKH1P11801 424 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 SRD5A1P18405 259 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 GSTM3P21266 225 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 RPS27P42677 84 aaKnown RBP7.9□□□□□ -1.14
HDAC3-215ENST00000519474 TNFAIP6P98066 277 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-215ENST00000519474 RGS21Q2M5E4 152 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 AARDQ4LEZ3 155 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 OR2T2Q6IF00 324 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 ACSM5Q6NUN0 579 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 RPL13AP3Q6NVV1 102 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 LYPD4Q6UWN0 246 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 CFAP77Q6ZQR2 320 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 C1orf229Q6ZS94 237 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-215ENST00000519474 CXXC5Q7LFL8 322 aaKnown RBP7.9□□□□□ -1.14
HDAC3-215ENST00000519474 AQP12AQ8IXF9 295 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 CDH26Q8IXH8 852 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 OR5AS1Q8N127 324 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 ZNF511Q8NB15 262 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 SLC37A3Q8NCC5 494 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 OR8G5Q8NG78 346 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 OR2Z1Q8NG97 314 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 OR51L1Q8NGJ5 315 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 OR5L1Q8NGL2 311 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 OR2AJ1Q8NGZ0 328 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 GIPC3Q8TF64 312 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 RAB1CQ92928 201 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 APOBEC3DQ96AK3 386 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-215ENST00000519474 TMEM186Q96B77 213 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 FEVQ99581 238 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 PITX2Q99697 317 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 RBM4Q9BWF3 364 aaKnown RBP7.9□□□□□ -1.14
HDAC3-215ENST00000519474 EGLN1Q9GZT9 426 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 HDHD2Q9H0R4 259 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 ZNF665Q9H7R5 613 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 REEP1Q9H902 201 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 WDR76Q9H967 626 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 LPAR2Q9HBW0 351 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 PTTG3PQ9NZH4 202 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 CGGBP1Q9UFW8 167 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-215ENST00000519474 IL19Q9UHD0 177 aa7.9□□□□□ -1.14
HDAC3-215ENST00000519474 JMJD1CQ15652 2540 aa7.9□□□□□ -1.15
HDAC3-215ENST00000519474 A0A1B0GVG6 124 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 C5orf63A6NC05 138 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 CLDN25C9JDP6 229 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 J3QW42 95 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 ZNF593O00488 134 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-215ENST00000519474 GSC2O15499 205 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 PLPP2O43688 288 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 CRTAPO75718 401 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-215ENST00000519474 SOX14O95416 240 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 CST1P01037 141 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 AVPP01185 164 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 HLA-DQA2P01906 255 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 MSMBP08118 114 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 SBK2P0C263 348 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 CLUP10909 449 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 ANPEPP15144 967 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 ZNF823P16415 610 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 PRKACGP22612 351 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 RGS6P49758 472 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 SRSF2Q01130 221 aaKnown RBP7.89□□□□□ -1.15
HDAC3-215ENST00000519474 ECH1Q13011 328 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 CRMP1Q14194 572 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 PCK2Q16822 640 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 TEX30Q5JUR7 227 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 LRRC28Q86X40 367 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-215ENST00000519474 PAPD5Q8NDF8 572 aaKnown RBP7.89□□□□□ -1.15
HDAC3-215ENST00000519474 OR52L1Q8NGH7 329 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 OR10Z1Q8NGY1 313 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 OR2T4Q8NH00 348 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 SPATA3Q8NHX4 192 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 ITLN1Q8WWA0 313 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 CCDC124Q96CT7 223 aaKnown RBP7.89□□□□□ -1.15
HDAC3-215ENST00000519474 LRGUKQ96M69 825 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 VCXQ9H320 206 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 HIF1ANQ9NWT6 349 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 KCNG2Q9UJ96 466 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 BAIAP2Q9UQB8 552 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 POLR1DQ9Y2S0 133 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 NPTNQ9Y639 398 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 COMMD3-BMI1R4GMX3 469 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 DYSFO75923 2080 aa7.89□□□□□ -1.15
HDAC3-215ENST00000519474 ARHGAP32A7KAX9 2087 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 TCRBV3S1A0A5B6 114 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 RNF212BA8MTL3 300 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 IQCF6A8MYZ5 107 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 GYG2O15488 501 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 PHF1O43189 567 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-215ENST00000519474 TIPRLO75663 272 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 IGHV2-5P01817 119 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 LCATP04180 440 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 GYPBP06028 91 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 SPI1P17947 270 aa7.88□□□□□ -1.15
HDAC3-215ENST00000519474 ANOS1P23352 680 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms