RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 GK2Q14410 553 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC9-203ENST00000517667 MESTQ5EB52 335 aa9.41□□□□□ -0.9
TRAPPC9-203ENST00000517667 COLCA1Q6ZS62 124 aa9.41□□□□□ -0.9
TRAPPC9-203ENST00000517667 BOLLQ8N9W6 283 aaKnown RBP9.41□□□□□ -0.9
TRAPPC9-203ENST00000517667 OR10A6Q8NH74 314 aa9.41□□□□□ -0.9
TRAPPC9-203ENST00000517667 SPRYD4Q8WW59 207 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC9-203ENST00000517667 ST8SIA4Q92187 359 aa9.41□□□□□ -0.9
TRAPPC9-203ENST00000517667 PHF21AQ96BD5 680 aa9.41□□□□□ -0.9
TRAPPC9-203ENST00000517667 ZNF570Q96NI8 536 aa9.41□□□□□ -0.9
TRAPPC9-203ENST00000517667 SEMA6AQ9H2E6 1030 aa9.41□□□□□ -0.9
TRAPPC9-203ENST00000517667 RANBP3Q9H6Z4 567 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC9-203ENST00000517667 RAB18Q9NP72 206 aa9.41□□□□□ -0.9
TRAPPC9-203ENST00000517667 ONECUT1Q9UBC0 465 aa9.41□□□□□ -0.9
TRAPPC9-203ENST00000517667 KAAG1Q9UBP8 84 aa9.41□□□□□ -0.9
TRAPPC9-203ENST00000517667 ADAM18Q9Y3Q7 739 aa9.41□□□□□ -0.9
TRAPPC9-203ENST00000517667 DNAH3Q8TD57 4116 aa9.41□□□□□ -0.9
TRAPPC9-203ENST00000517667 NPFFO15130 113 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 SLC22A2O15244 555 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 GMDSO60547 372 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 SLC16A7O60669 478 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 KHDRBS3O75525 346 aaKnown RBP9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 GYPAP02724 150 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 TNFRSF1BP20333 461 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 OR1E2P47887 323 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 IDH3AP50213 366 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 HIST1H3AP68431 136 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 EMX1Q04741 257 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 FHL1Q13642 323 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 KCNMB1Q16558 191 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 HIST2H3PS2Q5TEC6 136 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 CGB2Q6NT52 195 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 HIST2H3AQ71DI3 136 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 PGAP1Q75T13 922 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 FAM90A1Q86YD7 464 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 NRMQ8IXM6 262 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 MICU2Q8IYU8 434 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 KLHDC1Q8N7A1 406 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 C11orf44Q8N8P7 122 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 OR4F17Q8NGA8 305 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 PRRC1Q96M27 445 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 OR4F4Q96R69 305 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 EBF4Q9BQW3 602 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 ADAT1Q9BUB4 502 aaKnown RBP9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 FAM234AQ9H0X4 552 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 SYT4Q9H2B2 425 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 TOR3AQ9H497 397 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 RERGLQ9H628 205 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 NMNAT1Q9HAN9 279 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 SAR1AQ9NR31 198 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 FOXJ3Q9UPW0 622 aa9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 COA3Q9Y2R0 106 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC9-203ENST00000517667 MEIOCA2RUB1 952 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 VSIG8P0DPA2 414 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 CA6P23280 308 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 PRKCDQ05655 676 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 MZT1Q08AG7 82 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 ACSM1Q08AH1 577 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 ECH1Q13011 328 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 KRR1Q13601 381 aaKnown RBP9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 NFYCQ13952 458 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 MAPRE2Q15555 327 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 TEX36Q5VZQ5 186 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 C1orf122Q6ZSJ8 110 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 MRPL21Q7Z2W9 205 aaKnown RBP9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 FAM122BQ7Z309 247 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 CALHM3Q86XJ0 350 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 RNF113BQ8IZP6 322 aaKnown RBP9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 ARHGAP24Q8N264 748 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 LY6G5BQ8NDX9 201 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 OR13C2Q8NGS9 318 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 ACOT11Q8WXI4 607 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 SLCO4A1Q96BD0 722 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 CLPTM1LQ96KA5 538 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 Q96M85 177 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 SIRT7Q9NRC8 400 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 C1orf123Q9NWV4 160 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 VSX1Q9NZR4 365 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 MAB21L2Q9Y586 359 aa9.39□□□□□ -0.91
TRAPPC9-203ENST00000517667 H3BUX3 64 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 MUC1P15941 1255 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 SDHAP31040 664 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 SAA4P35542 130 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 GZMMP51124 257 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 UBE2E1P51965 193 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 PRSS12P56730 875 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 HOXA4Q00056 320 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 MICBQ29980 383 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 ZBED5Q49AG3 693 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 OTPQ5XKR4 325 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 NCR3LG1Q68D85 454 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 GPR139Q6DWJ6 353 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 ERICH5Q6P6B1 374 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 DNM1P34Q6PK57 102 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 SLC36A1Q7Z2H8 476 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 ADCK1Q86TW2 530 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 OFCC1Q8IZS5 231 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 GCSAMQ8N6F7 178 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 BEND2Q8NDZ0 799 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 TSPEARQ8WU66 669 aa9.38□□□□□ -0.91
TRAPPC9-203ENST00000517667 CMTM5Q96DZ9 223 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms