RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 DEFB128Q7Z7B8 93 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 LYG2Q86SG7 212 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 NIT1Q86X76 327 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 KMT5CQ86Y97 462 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 TGIF2LYQ8IUE0 185 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 C20orf196Q8IYI0 205 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF567Q8N184 647 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 BATF2Q8N1L9 274 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 COX18Q8N8Q8 333 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 ACOT4Q8N9L9 421 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR8G5Q8NG78 346 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR5A2Q8NGI9 324 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR4D5Q8NGN0 318 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR14C36Q8NHC7 312 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 JOSD2Q8TAC2 188 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 HASPINQ8TF76 798 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 ASB5Q8WWX0 329 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 CRYGNQ8WXF5 182 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 BCL2L2Q92843 193 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 ISOC2Q96AB3 205 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 PPCDCQ96CD2 204 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 TVP23CQ96ET8 276 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 JSRP1Q96MG2 331 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 SIGMAR1Q99720 223 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 MRPL45Q9BRJ2 306 aaKnown RBP4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 MED10Q9BTT4 135 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 NMES1Q9C002 83 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR11A1Q9GZK7 315 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 POLR2J3Q9H1A7 115 aaKnown RBP4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 POFUT1Q9H488 388 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 TUBB1Q9H4B7 451 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 TMEM38AQ9H6F2 299 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 ALG9Q9H6U8 611 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 SRD5A3Q9H8P0 318 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZMAT3Q9HA38 289 aaKnown RBP4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 BEX1Q9HBH7 125 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 APMAPQ9HDC9 416 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 MBNL1Q9NR56 388 aaKnown RBP4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC17A5Q9NRA2 495 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 UQCR10Q9UDW1 63 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 CHRNA9Q9UGM1 479 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 NAT8Q9UHE5 227 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 SHPKQ9UHJ6 478 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 CD84Q9UIB8 345 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 TBX21Q9UL17 535 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 MRPS16Q9Y3D3 137 aaKnown RBP4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 RAI2Q9Y5P3 530 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 LTN1O94822 1766 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 RGPD3A6NKT7 1758 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 RGPD4Q7Z3J3 1758 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 CAMTA1Q9Y6Y1 1673 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 TRAV14DV4A0A0A6YYC5 116 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 BORCS7-ASMTA0A0B4J1R7 106 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 NKX2-6A6NCS4 301 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 TLCD2A6NGC4 264 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 ARL5CA6NH57 179 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF705FA8MVS1 300 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 FAM157AC9JC47 383 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 PRAMEF26H0Y7S4 382 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 H3BN98 237 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 RAB27BO00194 218 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC33A1O00400 549 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC17A3O00476 420 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 GABRDO14764 452 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 HNRNPDLO14979 420 aaKnown RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 PRAMEF11O60813 436 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 DUS4LO95620 317 aaKnown RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 SNAI1O95863 264 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 MPIG6BO95866 241 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 JCHAINP01591 159 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 C1QCP02747 245 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 TRGC2P03986 189 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 LCATP04180 440 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 IFNW1P05000 195 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 ARG1P05089 322 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 ANXA4P09525 319 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 ANKRD34CP0C6C1 535 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 SEC11BP0C7V7 166 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF705DP0CH99 300 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF705BP0CI00 300 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 TFPIP10646 304 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 CD19P15391 556 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 CD1DP15813 335 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 RPS4Y1P22090 263 aaKnown RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 AK4P27144 223 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 NMBRP28336 390 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 CD34P28906 385 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 NPY4RP50391 375 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 WNT3AP56704 352 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 PIGPP57054 158 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 UBE2MP61081 183 aaKnown RBP4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 BAXQ07812 192 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 MEF2DQ14814 521 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 VAMP3Q15836 100 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 UPP1Q16831 310 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC35G1Q2M3R5 365 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 SOWAHAQ2M3V2 549 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 PRTGQ2VWP7 1150 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 SNAI3Q3KNW1 292 aa4.3□□□□□ -1.72
HMGB1P19-201ENST00000517578 LINC00303Q3SY05 128 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms