RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 TGM4P49221 684 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 TPMTP51580 245 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 KLF3P57682 345 aaPredicted RBP0.43□□□□□ -2.34
PDGFC-208ENST00000512711 TAS2R46P59540 309 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 KRTAP10-4P60372 401 aaPredicted RBP0.43□□□□□ -2.34
PDGFC-208ENST00000512711 UBE2HP62256 183 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 IMMTQ16891 758 aaKnown RBP0.43□□□□□ -2.34
PDGFC-208ENST00000512711 CFAP157Q5JU67 520 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 MBOAT1Q6ZNC8 495 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 Q6ZSA8 131 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 MRPL55Q7Z7F7 128 aaKnown RBP0.43□□□□□ -2.34
PDGFC-208ENST00000512711 MDP1Q86V88 176 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 ERO1BQ86YB8 467 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 B3GNT7Q8NFL0 401 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 SLC26A10Q8NG04 563 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 OR1L1Q8NH94 360 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 TMEM230Q96A57 120 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 SLC29A1Q99808 456 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 PDCD1LG2Q9BQ51 273 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 ROPN1BQ9BZX4 212 aaPredicted RBP0.43□□□□□ -2.34
PDGFC-208ENST00000512711 SLIRPQ9GZT3 109 aaKnown RBP0.43□□□□□ -2.34
PDGFC-208ENST00000512711 NEUROG2Q9H2A3 272 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 OR51M1Q9H341 326 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 MED4Q9NPJ6 270 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 MRPS7Q9Y2R9 242 aaKnown RBP0.43□□□□□ -2.34
PDGFC-208ENST00000512711 FHOD3Q2V2M9 1422 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 AKNAQ7Z591 1439 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 BAZ1BQ9UIG0 1483 aaKnown RBP0.42□□□□□ -2.34
PDGFC-208ENST00000512711 KMT2EQ8IZD2 1858 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 SPATA31E1Q6ZUB1 1445 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 IGKV1-6A0A0C4DH72 117 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 A0A1W2PNM2 257 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 CHMP2AO43633 222 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 CDC40O60508 579 aaKnown RBP eCLIP0.42□□□□□ -2.34
PDGFC-208ENST00000512711 IL1BP01584 269 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 IGKV1-39P01597 117 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 IGHMP01871 453 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 IGKV1D-39P04432 117 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 CTSGP08311 255 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 THRAP10827 490 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 TMED10P49755 219 aaKnown RBP0.42□□□□□ -2.34
PDGFC-208ENST00000512711 ZNF83P51522 516 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 AIF1P55008 147 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 PLP1P60201 277 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 IL5RAQ01344 420 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 SEMG2Q02383 582 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 BTN1A1Q13410 526 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 TPBGQ13641 420 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 PDK3Q15120 406 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 LDLRAD2Q5SZI1 272 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 LIN9Q5TKA1 542 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 UBE2UQ5VVX9 321 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 TMPPEQ6ZT21 453 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 SLC2A14Q8TDB8 520 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 CCDC126Q96EE4 140 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 SLC41A3Q96GZ6 507 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 OR4K3Q96R72 315 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 ABCG5Q9H222 651 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 VCX2Q9H322 139 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 MYOZ1Q9NP98 299 aaPredicted RBP0.42□□□□□ -2.34
PDGFC-208ENST00000512711 HMGXB4Q9UGU5 601 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 LGALS13Q9UHV8 139 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 LRRC42Q9Y546 428 aa0.42□□□□□ -2.34
PDGFC-208ENST00000512711 ADAMTS7Q9UKP4 1686 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 OR52A4PA6NMU1 304 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 RAB29O14966 203 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 FLOT1O75955 427 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 SLC35G6P0C7Q6 338 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 P0DMU3 169 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 FAM231AP0DMU4 169 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 FAM231CP0DMU5 169 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 RAB9AP51151 201 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 CDH6P55285 790 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 CCDC92Q53HC0 331 aaPredicted RBP0.41□□□□□ -2.34
PDGFC-208ENST00000512711 ZNF678Q5SXM1 525 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 PMF1Q6P1K2 205 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 CDR2LQ86X02 465 aaPredicted RBP0.41□□□□□ -2.34
PDGFC-208ENST00000512711 FAM71AQ8IYT1 594 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 OR52N1Q8NH53 320 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 APH1BQ8WW43 257 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 OTUB2Q96DC9 234 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 KCNS1Q96KK3 526 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 C20orf166-AS1Q96NR2 134 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 ANKRD60Q9BZ19 345 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 GCOM2Q9BZD3 368 aaPredicted RBP0.41□□□□□ -2.34
PDGFC-208ENST00000512711 CA10Q9NS85 328 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 CSDC2Q9Y534 153 aaKnown RBP0.41□□□□□ -2.34
PDGFC-208ENST00000512711 NUP205Q92621 2012 aa0.41□□□□□ -2.34
PDGFC-208ENST00000512711 BRCA1P38398 1863 aaKnown RBP0.41□□□□□ -2.34
PDGFC-208ENST00000512711 MALRD1Q5VYJ5 2156 aa0.4□□□□□ -2.34
PDGFC-208ENST00000512711 C2orf16Q68DN1 1984 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 IGKV1OR2-108A0A075B7D4 117 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 XKRY2A2RUG3 117 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 PDZK1P1A8MUH7 402 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 TAAR5O14804 337 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 PALMO75781 387 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 GATBO75879 557 aaKnown RBP0.4□□□□□ -2.35
PDGFC-208ENST00000512711 TGM6O95932 706 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 ARG1P05089 322 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 IL32P24001 234 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms