RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 NABP1Q96AH0 204 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 KCTD12Q96CX2 325 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 BOD1Q96IK1 185 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 ZFP3Q96NJ6 502 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 WDFY2Q96P53 400 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 CHODLQ9H9P2 273 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 TMEM160Q9NX00 188 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 CLCF1Q9UBD9 225 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 METRNQ9UJH8 293 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 GDF2Q9UK05 429 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 PEX16Q9Y5Y5 336 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 LHFPL6Q9Y693 200 aa9.11□□□□□ -0.95
PDLIM5-217ENST00000512274 IGHV4-30-2A0A087WSY4 118 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 ZNF878C9JN71 531 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 C16orf97H3BN30 126 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 LMX1BO60663 402 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 ZFPL1O95159 310 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 YES1P07947 543 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 SOD3P08294 240 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 CST2P09228 141 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 SPARCP09486 303 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 OR8G3PP0DMU2 310 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 CD8BP10966 210 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 NR4A1P22736 598 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 EDNRAP25101 427 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 OTX1P32242 354 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 RPS19P39019 145 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 SELENOPP49908 381 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 NANOS3P60323 173 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 LSM3P62310 102 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 DEFA6Q01524 100 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 EIF2B1Q14232 305 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 ZNF829Q3KNS6 432 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 ZMAT1Q5H9K5 638 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 ALKBH2Q6NS38 261 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 ARL9Q6T311 187 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 Q6ZSR3 168 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 AAED1Q7RTV5 226 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 DCXRQ7Z4W1 244 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 DPPA2Q7Z7J5 298 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 CATSPERDQ86XM0 798 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 YIPF7Q8N8F6 280 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 CCDC54Q8NEL0 328 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 GJC3Q8NFK1 279 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 IL17RDQ8NFM7 739 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 THEM6Q8WUY1 208 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 ACOT12Q8WYK0 555 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 NSMAFQ92636 917 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 WNT2BQ93097 391 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 STARD4Q96DR4 205 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 PLPPR2Q96GM1 343 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 ZNF845Q96IR2 970 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 AMELYQ99218 206 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 ULBP2Q9BZM5 246 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 ESRP2Q9H6T0 727 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 EXOSC4Q9NPD3 245 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 PNRC2Q9NPJ4 139 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 AKIP1Q9NQ31 210 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 SLCO1C1Q9NYB5 712 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 FRRS1LQ9P0K9 344 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 CRNNQ9UBG3 495 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 R4GMQ9 66 aa9.1□□□□□ -0.95
PDLIM5-217ENST00000512274 TRBV5-7A0A0A0MS05 114 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 IGHV3-15A0A0B4J1V0 119 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 A0A0G2JK05 382 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 ZNF879B4DU55 563 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 OVOL3O00110 214 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 SSX4O60224 188 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 SS18L1O75177 396 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 MRPL33O75394 65 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 APOC1P02654 83 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 THBDP07204 575 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 CD37P11049 281 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 NTF4P34130 210 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 SCAND1P57086 179 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 PSMA6P60900 246 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 GRB2P62993 217 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 DBPQ10586 325 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 ECH1Q13011 328 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 KRTAP27-1Q3LI81 207 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 Q499Y3 187 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 ACSM3Q53FZ2 586 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 BEX5Q5H9J7 111 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 CYB5R2Q6BCY4 276 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 HIST2H2BDQ6DRA6 164 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 C22orf42Q6IC83 251 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 DNM1P46Q6ZS02 220 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 KRT77Q7Z794 578 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 ZFP41Q8N8Y5 198 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 OR10S1Q8NGN2 331 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 OR2AJ1Q8NGZ0 328 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 OR5AK2Q8NH90 309 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 SGMS2Q8NHU3 365 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 MCFD2Q8NI22 146 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 GPR148Q8TDV2 347 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 ABHD3Q8WU67 409 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 SMAP2Q8WU79 429 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 TMEM203Q969S6 136 aa9.09□□□□□ -0.95
PDLIM5-217ENST00000512274 GMPPAQ96IJ6 420 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms