RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 RAB3AP20336 220 aa13.26□□□□□ -0.29
SCLT1-209ENST00000511426 THBS4P35443 961 aa13.26□□□□□ -0.29
SCLT1-209ENST00000511426 NR4A2P43354 598 aa13.26□□□□□ -0.29
SCLT1-209ENST00000511426 MAGEB1P43366 347 aa13.26□□□□□ -0.29
SCLT1-209ENST00000511426 RAB1AP62820 205 aa13.26□□□□□ -0.29
SCLT1-209ENST00000511426 GSG1Q2KHT4 349 aa13.26□□□□□ -0.29
SCLT1-209ENST00000511426 TBRG1Q3YBR2 411 aa13.26□□□□□ -0.29
SCLT1-209ENST00000511426 OR6M1Q8NGM8 313 aa13.26□□□□□ -0.29
SCLT1-209ENST00000511426 AKR7LQ8NHP1 331 aa13.26□□□□□ -0.29
SCLT1-209ENST00000511426 RAB40AQ8WXH6 277 aa13.26□□□□□ -0.29
SCLT1-209ENST00000511426 AKAP1Q92667 903 aaKnown RBP eCLIP13.26□□□□□ -0.29
SCLT1-209ENST00000511426 UQCC2Q9BRT2 126 aa13.26□□□□□ -0.29
SCLT1-209ENST00000511426 NEK6Q9HC98 313 aa13.26□□□□□ -0.29
SCLT1-209ENST00000511426 B3GNT2Q9NY97 397 aa13.26□□□□□ -0.29
SCLT1-209ENST00000511426 ZNF835Q9Y2P0 537 aa13.26□□□□□ -0.29
SCLT1-209ENST00000511426 DCHS1Q96JQ0 3298 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 C1QTNF9BB2RNN3 333 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 MAS1P04201 325 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 ALDOBP05062 364 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 C1QTNF9P0C862 333 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 SLC2A1P11166 492 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 IGHV1-2P23083 117 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 BDKRB2P30411 391 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
SCLT1-209ENST00000511426 CEACAM8P31997 349 aaPredicted RBP13.25□□□□□ -0.29
SCLT1-209ENST00000511426 GNALP38405 381 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 UBE2NP61088 152 aaKnown RBP13.25□□□□□ -0.29
SCLT1-209ENST00000511426 KLRB1Q12918 225 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 UBE2NLQ5JXB2 153 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 ZBTB37Q5TC79 503 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 RTL6Q6ICC9 239 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 ASPHD2Q6ICH7 369 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 FAM131AQ6UXB0 335 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 UTS2BQ765I0 119 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 GABRG1Q8N1C3 465 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 SAMD12Q8N8I0 201 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 OR1J2Q8NGS2 313 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 FGFBP3Q8TAT2 258 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 FGGYQ96C11 551 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 LIN7BQ9HAP6 207 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 TAS2R4Q9NYW5 299 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 ZNF319Q9P2F9 582 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 FAM215AQ9Y5M1 114 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 AKAP13Q12802 2813 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 URB1O60287 2271 aaKnown RBP13.25□□□□□ -0.29
SCLT1-209ENST00000511426 ACACAQ13085 2346 aa13.25□□□□□ -0.29
SCLT1-209ENST00000511426 A0A096LPE4 126 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 A0A1W2PPZ6 126 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 TBX1O43435 398 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 SULT1B1O43704 296 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 CGAP01215 116 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 HLA-HP01893 362 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 LCATP04180 440 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 DBHP09172 617 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 SLC2A2P11168 524 aaPredicted RBP13.24□□□□□ -0.29
SCLT1-209ENST00000511426 STOMP27105 288 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 HOXC12P31275 282 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 FOXG1P55316 489 aaPredicted RBP13.24□□□□□ -0.29
SCLT1-209ENST00000511426 C1orf100Q5SVJ3 147 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 C9orf135Q5VTT2 229 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 FAM166AQ6J272 317 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 CNIH2Q6PI25 160 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 SEM1Q6ZVN7 128 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 CISD2Q8N5K1 135 aaKnown RBP13.24□□□□□ -0.29
SCLT1-209ENST00000511426 MINDY2Q8NBR6 621 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 OR1M1Q8NGA1 313 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 C15orf40Q8WUR7 153 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 SPSB4Q96A44 273 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 CPNE2Q96FN4 548 aaPredicted RBP13.24□□□□□ -0.29
SCLT1-209ENST00000511426 SORCS2Q96PQ0 1159 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 SRRQ9GZT4 340 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 ABCG5Q9H222 651 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 METTL17Q9H7H0 456 aaPredicted RBP13.24□□□□□ -0.29
SCLT1-209ENST00000511426 LUZP4Q9P127 313 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 CACNA1GO43497 2377 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 FAM25AB3EWG3 89 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 FAM25CB3EWG5 89 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 FAM25GB3EWG6 89 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 ICMTO60725 284 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 PATE4P0C8F1 98 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 CD79AP11912 226 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 EDN3P14138 238 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 APLNRP35414 380 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 MRPL49Q13405 166 aaKnown RBP13.24□□□□□ -0.29
SCLT1-209ENST00000511426 GABRA6Q16445 453 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 GFRALQ6UXV0 394 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 CPEB3Q8NE35 698 aaKnown RBP13.24□□□□□ -0.29
SCLT1-209ENST00000511426 LGALS14Q8TCE9 139 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 APOBEC3DQ96AK3 386 aaPredicted RBP13.24□□□□□ -0.29
SCLT1-209ENST00000511426 ORAI1Q96D31 301 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 SNRNP40Q96DI7 357 aaKnown RBP13.24□□□□□ -0.29
SCLT1-209ENST00000511426 STARD4Q96DR4 205 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 ADAT3Q96EY9 351 aaPredicted RBP13.24□□□□□ -0.29
SCLT1-209ENST00000511426 FAM71F1Q96KD3 344 aaPredicted RBP13.24□□□□□ -0.29
SCLT1-209ENST00000511426 TECTBQ96PL2 329 aa13.24□□□□□ -0.29
SCLT1-209ENST00000511426 USB1Q9BQ65 265 aaKnown RBP13.24□□□□□ -0.29
SCLT1-209ENST00000511426 PHF3Q92576 2039 aaKnown RBP13.23□□□□□ -0.29
SCLT1-209ENST00000511426 CIB4A0PJX0 185 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 ELK1P19419 428 aa13.23□□□□□ -0.29
SCLT1-209ENST00000511426 OPRM1P35372 400 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms