RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 SGTBQ96EQ0 304 aa3.34□□□□□ -1.87
CHD1-206ENST00000511067 CERS2Q96G23 380 aa3.34□□□□□ -1.87
CHD1-206ENST00000511067 SAMD10Q9BYL1 202 aa3.34□□□□□ -1.87
CHD1-206ENST00000511067 OR52D1Q9H346 318 aa3.34□□□□□ -1.87
CHD1-206ENST00000511067 TDRD3Q9H7E2 651 aaKnown RBP3.34□□□□□ -1.87
CHD1-206ENST00000511067 TMEM27Q9HBJ8 222 aa3.34□□□□□ -1.87
CHD1-206ENST00000511067 SLC17A7Q9P2U7 560 aa3.34□□□□□ -1.87
CHD1-206ENST00000511067 RHBDD3Q9Y3P4 386 aa3.34□□□□□ -1.87
CHD1-206ENST00000511067 ADGRA3Q8IWK6 1321 aa3.34□□□□□ -1.87
CHD1-206ENST00000511067 IGKV1-8A0A0C4DH67 115 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 H0YC42 278 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 TDP2O95551 362 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 C1GALT1C1LP0DN25 315 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 HTR1DP28221 377 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 PPICP45877 212 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 GFERP55789 205 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 SLC39A6Q13433 755 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 TFDP2Q14188 446 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 HADHQ16836 314 aaKnown RBP3.33□□□□□ -1.88
CHD1-206ENST00000511067 ULK3Q6PHR2 472 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 SLC16A13Q7RTY0 426 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 LINC00523Q86TU6 105 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 OR4K5Q8NGD3 323 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 OR5AR1Q8NGP9 310 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 OR6N1Q8NGY5 312 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 SYNPRQ8TBG9 265 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 HAUS1Q96CS2 278 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 SLIRPQ9GZT3 109 aaKnown RBP3.33□□□□□ -1.88
CHD1-206ENST00000511067 TOLLIPQ9H0E2 274 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 CYTL1Q9NRR1 136 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 RGS18Q9NS28 235 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 OPN4Q9UHM6 478 aa3.33□□□□□ -1.88
CHD1-206ENST00000511067 TSSC4Q9Y5U2 329 aaPredicted RBP3.33□□□□□ -1.88
CHD1-206ENST00000511067 SERPINE3A8MV23 424 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 ZNF99A8MXY4 864 aaPredicted RBP3.32□□□□□ -1.88
CHD1-206ENST00000511067 TAAR5O14804 337 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 SCELO95171 688 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 HLA-DQA1P01909 254 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 ADRA2AP08913 450 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 OR8U9P0C7N5 309 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 GZMAP12544 262 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 SERPINB8P50452 374 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 RAB7AP51149 207 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 LINC00315P59091 139 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 RPL23P62829 140 aaKnown RBP3.32□□□□□ -1.88
CHD1-206ENST00000511067 CRADDP78560 199 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 CDK5Q00535 292 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 KDSRQ06136 332 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 WDR43Q15061 677 aaKnown RBP eCLIP3.32□□□□□ -1.88
CHD1-206ENST00000511067 GABRA6Q16445 453 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 ABCA11PQ4W5N1 156 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 ZNF684Q5T5D7 378 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 MRPL21Q7Z2W9 205 aaKnown RBP3.32□□□□□ -1.88
CHD1-206ENST00000511067 VTCN1Q7Z7D3 282 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 WDFY1Q8IWB7 410 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 ARRDC1Q8N5I2 433 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 UBAC2Q8NBM4 344 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 ZNF488Q96MN9 340 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 SPIN2AQ99865 258 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 SPIN2BQ9BPZ2 258 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 C1orf198Q9H425 327 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 CYP3A43Q9HB55 503 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 RFNGQ9Y644 331 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 PCDH11XQ9BZA7 1347 aa3.32□□□□□ -1.88
CHD1-206ENST00000511067 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 SLIT3O75094 1523 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 SLC22A20A6NK97 555 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 CHST10O43529 356 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 NMT2O60551 498 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 SLC16A7O60669 478 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 RAD1O60671 282 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 MPDU1O75352 247 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 CD37P11049 281 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 MUC1P15941 1255 aaPredicted RBP3.31□□□□□ -1.88
CHD1-206ENST00000511067 SRMP19623 302 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 TUBG1P23258 451 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 BMI1P35226 326 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 TALDO1P37837 337 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 C5orf64Q2M2E5 130 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 ZNF829Q3KNS6 432 aaPredicted RBP3.31□□□□□ -1.88
CHD1-206ENST00000511067 MPV17L2Q567V2 206 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 TPRG1LQ5T0D9 272 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 LGI3Q8N145 548 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 CSGALNACT2Q8N6G5 542 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 C19orf18Q8NEA5 215 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 TEAD3Q99594 435 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 AGMATQ9BSE5 352 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 FANCEQ9HB96 536 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 RRAGDQ9NQL2 400 aaPredicted RBP3.31□□□□□ -1.88
CHD1-206ENST00000511067 DYRK4Q9NR20 520 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 TUBG2Q9NRH3 451 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 CHTOPQ9Y3Y2 248 aaKnown RBP3.31□□□□□ -1.88
CHD1-206ENST00000511067 COMMD3-BMI1R4GMX3 469 aa3.31□□□□□ -1.88
CHD1-206ENST00000511067 COL27A1Q8IZC6 1860 aaPredicted RBP3.3□□□□□ -1.88
CHD1-206ENST00000511067 LRCOL1A6NCL2 159 aa3.3□□□□□ -1.88
CHD1-206ENST00000511067 GABRR3A8MPY1 467 aa3.3□□□□□ -1.88
CHD1-206ENST00000511067 KRBOX1C9JBD0 128 aa3.3□□□□□ -1.88
CHD1-206ENST00000511067 TNFRSF11BO00300 401 aa3.3□□□□□ -1.88
CHD1-206ENST00000511067 SNAI1O95863 264 aaPredicted RBP3.3□□□□□ -1.88
CHD1-206ENST00000511067 ZNF688P0C7X2 276 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms