RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 PSG4Q00888 419 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 SNTB2Q13425 540 aaKnown RBP3.87□□□□□ -1.79
NUP54-206ENST00000508465 CCNIQ14094 377 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 ZIK1Q3SY52 487 aaPredicted RBP3.87□□□□□ -1.79
NUP54-206ENST00000508465 PABPC1L2AQ5JQF8 200 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 SPATA46Q5T0L3 261 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 THEM4Q5T1C6 240 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 LIN54Q6MZP7 749 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 ZNF774Q6NX45 483 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 ZNF544Q6NX49 715 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 CLEC2AQ6UVW9 174 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 MOGAT3Q86VF5 341 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 DHFR2Q86XF0 187 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 ZDHHC21Q8IVQ6 265 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 CCDC36Q8IYA8 594 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 SPARTQ8N0X7 666 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 ICA1LQ8NDH6 482 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 SLC30A7Q8NEW0 376 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 NOXO1Q8NFA2 376 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 BCAS4Q8TDM0 211 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 GTF3AQ92664 365 aaKnown RBP3.87□□□□□ -1.79
NUP54-206ENST00000508465 NABP1Q96AH0 204 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 MCUR1Q96AQ8 359 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 RSRC1Q96IZ7 334 aaKnown RBP3.87□□□□□ -1.79
NUP54-206ENST00000508465 ZNF479Q96JC4 524 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 SAMD8Q96LT4 415 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 TSSK2Q96PF2 358 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 ERMAPQ96PL5 475 aaPredicted RBP3.87□□□□□ -1.79
NUP54-206ENST00000508465 MRPL37Q9BZE1 423 aaKnown RBP3.87□□□□□ -1.79
NUP54-206ENST00000508465 WNT5BQ9H1J7 359 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 TPK1Q9H3S4 243 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 PLK3Q9H4B4 646 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 DENND2DQ9H6A0 471 aaPredicted RBP3.87□□□□□ -1.79
NUP54-206ENST00000508465 SIAEQ9HAT2 523 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 CDH20Q9HBT6 801 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 CCNB1IP1Q9NPC3 277 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 IL1RAPQ9NPH3 570 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 VNN3Q9NY84 501 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 TAS2R1Q9NYW7 299 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 KIF17Q9P2E2 1029 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 TMCC3Q9ULS5 477 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 SAMD4AQ9UPU9 718 aaKnown RBP3.87□□□□□ -1.79
NUP54-206ENST00000508465 AURKCQ9UQB9 309 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 CMAHPQ9Y471 501 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 CSPG4Q6UVK1 2322 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 PLCE1Q9P212 2302 aa3.87□□□□□ -1.79
NUP54-206ENST00000508465 IQCMA0A1B0GVH7 501 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 HTR3EA5X5Y0 456 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 B9A039 149 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 H7C417 338 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 TNFRSF11BO00300 401 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 DCTN6O00399 190 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 XKRYO14609 159 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 ACOT8O14734 319 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 MGRN1O60291 552 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 OR10H3O60404 316 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 TMCC2O75069 709 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 GAS8-AS1O95177 125 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 NDUFB2O95178 105 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 NGFP01138 241 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 IGF2P01344 180 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 IGHMP01871 453 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 FABP3P05413 133 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 LCKP06239 509 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 HEXAP06865 529 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 DAOP14920 347 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 CTLA4P16410 223 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 ZNF32P17041 273 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 ITGA2P17301 1181 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 COL8A2P25067 703 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 STOMP27105 288 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 WNT5AP41221 380 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 GUCA1AP43080 201 aaPredicted RBP3.86□□□□□ -1.79
NUP54-206ENST00000508465 GDI2P50395 445 aaKnown RBP3.86□□□□□ -1.79
NUP54-206ENST00000508465 ZNF133P52736 654 aaPredicted RBP3.86□□□□□ -1.79
NUP54-206ENST00000508465 UCP2P55851 309 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 RIPPLY3P57055 190 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 SMIM11AP58511 58 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 MRPS34P82930 218 aaKnown RBP3.86□□□□□ -1.79
NUP54-206ENST00000508465 GALK2Q01415 458 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 HSF2Q03933 536 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 GLO1Q04760 184 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 KRR1Q13601 381 aaKnown RBP3.86□□□□□ -1.79
NUP54-206ENST00000508465 ENDOGQ14249 297 aaKnown RBP3.86□□□□□ -1.79
NUP54-206ENST00000508465 GGTLC2Q14390 218 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 EFNB3Q15768 340 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 MEP1BQ16820 701 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 TBC1D28Q2M2D7 210 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 RFX4Q33E94 735 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 SLC36A2Q495M3 483 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 MESTQ5EB52 335 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 CLEC12AQ5QGZ9 265 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 C10orf128Q5T292 105 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 C1QTNF12Q5T7M4 302 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 FAM27BQ5VT28 67 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 GFI1BQ5VTD9 330 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 KRTAP5-1Q6L8H4 278 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 TMEM154Q6P9G4 183 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 CORO6Q6QEF8 472 aa3.86□□□□□ -1.79
NUP54-206ENST00000508465 SMARCD3Q6STE5 483 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms