RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 NEK6Q9HC98 313 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 DLL4Q9NR61 685 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 GRIP1Q9Y3R0 1128 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 R4GMQ9 66 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.26□□□□□ -1.25
PDGFC-205ENST00000506880 TMEM269A0A1B0GVZ9 245 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 A0A1W2PPR1 153 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 DAPL1A0PJW8 107 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 TMEM212A6NML5 194 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 FAM171A2A8MVW0 826 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 F5H5K5 113 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 SELENOFO60613 162 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 ALX3O95076 343 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 F12P00748 615 aaPredicted RBP7.26□□□□□ -1.25
PDGFC-205ENST00000506880 IGLV3-1P01715 115 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 LCATP04180 440 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 PATE4P0C8F1 98 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 TNFRSF1AP19438 455 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 CCL1P22362 96 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 SLC6A9P48067 706 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 CX3CR1P49238 355 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 AQP4P55087 323 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 GABARAPL2P60520 117 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 ACSM1Q08AH1 577 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 GPR50Q13585 617 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 OR8B8Q15620 311 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 ZNF181Q2M3W8 571 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 TMEM244Q5VVB8 128 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 KRT80Q6KB66 452 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 TMEM154Q6P9G4 183 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 CORO6Q6QEF8 472 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 IZUMO2Q6UXV1 221 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 PGAP1Q75T13 922 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 MYPOPQ86VE0 399 aaPredicted RBP7.26□□□□□ -1.25
PDGFC-205ENST00000506880 LINC00346Q8IVM7 164 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 ZNF101Q8IZC7 436 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 OR8G5Q8NG78 346 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 ZNRF4Q8WWF5 429 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 NRG4Q8WWG1 115 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 LGALS12Q96DT0 336 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 TMEM80Q96HE8 168 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 C1QTNF6Q9BXI9 259 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 CDCA4Q9BXL8 241 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 TRIM36Q9NQ86 728 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 CENPMQ9NSP4 180 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 FKBP14Q9NWM8 211 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 DNAJC27Q9NZQ0 273 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 IL19Q9UHD0 177 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 PSORS1C1Q9UIG5 152 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 PURGQ9UJV8 347 aaKnown RBP7.26□□□□□ -1.25
PDGFC-205ENST00000506880 LRP12Q9Y561 859 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 MPC1Q9Y5U8 109 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 TANC2Q9HCD6 1990 aa7.26□□□□□ -1.25
PDGFC-205ENST00000506880 PDZD2O15018 2839 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 TEX15Q9BXT5 2789 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 A0A1W2PQL4 384 aaPredicted RBP7.25□□□□□ -1.25
PDGFC-205ENST00000506880 C17orf100A8MU93 164 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 LOC110117498-PIK3R3F6TDL0 507 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 GPRIN2O60269 458 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 FAM20BO75063 409 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 PTBP3O95758 552 aaKnown RBP7.25□□□□□ -1.25
PDGFC-205ENST00000506880 PLAUP00749 431 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 CD8AP01732 235 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 PRF1P14222 555 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 CCNOP22674 350 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 NAA10P41227 235 aaPredicted RBP7.25□□□□□ -1.25
PDGFC-205ENST00000506880 GATA4P43694 442 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 MAP2K3P46734 347 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 MMP15P51511 669 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 GBX2P52951 348 aaPredicted RBP7.25□□□□□ -1.25
PDGFC-205ENST00000506880 ZNF121P58317 390 aaPredicted RBP7.25□□□□□ -1.25
PDGFC-205ENST00000506880 SNTB1Q13884 538 aaKnown RBP7.25□□□□□ -1.25
PDGFC-205ENST00000506880 TIGD6Q17RP2 521 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 NKPD1Q17RQ9 610 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 MST1LQ2TV78 715 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 C11orf91Q3C1V1 193 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 C6orf141Q5SZD1 244 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 ALKBH2Q6NS38 261 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 B3GLCTQ6Y288 498 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 RFPL4BQ6ZWI9 263 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 MRPL21Q7Z2W9 205 aaKnown RBP7.25□□□□□ -1.25
PDGFC-205ENST00000506880 LURAP1LQ8IV03 231 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 ELMOD2Q8IZ81 293 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 OR10H4Q8NGA5 316 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 SLC25A40Q8TBP6 338 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 RPS4Y2Q8TD47 263 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 APH1BQ8WW43 257 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 CPNE2Q96FN4 548 aaPredicted RBP7.25□□□□□ -1.25
PDGFC-205ENST00000506880 SLC30A2Q9BRI3 323 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 OR2J1Q9GZK6 312 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 DUSP21Q9H596 190 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 DYNLRB1Q9NP97 96 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 ISYNA1Q9NPH2 558 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 FAM206AQ9NX38 181 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 ERVK13-1Q9NX77 482 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 IKZF2Q9UKS7 526 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 LAMP3Q9UQV4 416 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 ERGIC3Q9Y282 383 aa7.25□□□□□ -1.25
PDGFC-205ENST00000506880 hCG_38984A0A1B0GV85 526 aa7.24□□□□□ -1.25
PDGFC-205ENST00000506880 A0A1W2PPW3 197 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms