RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 PRSS37A4D1T9 235 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 HTR3EA5X5Y0 456 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 AHCYL1O43865 530 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 GMDSO60547 372 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 PTBP3O95758 552 aaKnown RBP9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 LHBP01229 141 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 DUX4L2P0CJ85 424 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 DUX4L3P0CJ86 424 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 DUX4L4P0CJ87 422 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 DUX4L5P0CJ88 424 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 DUX4L6P0CJ89 424 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 DUX4L7P0CJ90 424 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 ZNF26P17031 533 aaPredicted RBP9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 CENPAP49450 140 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 UBE2E1P51965 193 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 ELF3P78545 371 aaPredicted RBP9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 ACSM1Q08AH1 577 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 MALLQ13021 153 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 MESTQ5EB52 335 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 TNFAIP8L3Q5GJ75 292 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 TEX36Q5VZQ5 186 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 DUX4L9Q6RFH8 374 aaPredicted RBP9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 DTX3Q8N9I9 347 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 OR51G2Q8NGK0 314 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 OR10A6Q8NH74 314 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 C17orf50Q8WW18 174 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 RORBQ92753 470 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 DMRTB1Q96MA1 342 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 COQ7Q99807 217 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 OCSTAMPQ9BR26 566 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 SLC22A4Q9H015 551 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 RANBP3Q9H6Z4 567 aaPredicted RBP9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 KAT8Q9H7Z6 458 aaKnown RBP9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 RAB18Q9NP72 206 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 DUX4Q9UBX2 424 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 AURKCQ9UQB9 309 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 POLR1DQ9Y2S0 133 aa9.43□□□□□ -0.9
CCHCR1-219ENST00000505392 hCG_1807616A0A1W2PRN6 198 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 A6NLC8 198 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 CD300LBA8K4G0 201 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 ADARB2-AS1A8MUL3 147 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 EFCAB9A8MZ26 197 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 IMPA2O14732 288 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 POLR3GO15318 223 aaPredicted RBP9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 LCATP04180 440 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 CD14P08571 375 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 HIST1H3AP68431 136 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 ST3GAL3Q11203 375 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 ECH1Q13011 328 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 MEP1BQ16820 701 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 ANKDD1AQ495B1 522 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 HIST2H3PS2Q5TEC6 136 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 CRIP3Q6Q6R5 217 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 CORO6Q6QEF8 472 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 HIST2H3AQ71DI3 136 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 CCDC80Q76M96 950 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 DHDDSQ86SQ9 333 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 NRMQ8IXM6 262 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 OR13C2Q8NGS9 318 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 SLC7A13Q8TCU3 470 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 CGREF1Q99674 301 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 NKX3-1Q99801 234 aaPredicted RBP9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 ADAT1Q9BUB4 502 aaKnown RBP9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 NPFFR1Q9GZQ6 430 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 HDHD2Q9H0R4 259 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 SYT4Q9H2B2 425 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 NMNAT1Q9HAN9 279 aaPredicted RBP9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 BAG5Q9UL15 447 aa9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 NOP16Q9Y3C1 178 aaKnown RBP9.42□□□□□ -0.9
CCHCR1-219ENST00000505392 TMEM120BA0PK00 339 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 NDUFB3O43676 98 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 ACSM4P0C7M7 580 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 PAX6P26367 422 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 SLC9A3P48764 834 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 IDH3AP50213 366 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 KRTAP10-11P60412 298 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 PRKCDQ05655 676 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 IKZF1Q13422 519 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 HABP2Q14520 560 aaPredicted RBP9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 KCNMB1Q16558 191 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 MICBQ29980 383 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 VMACQ2NL98 169 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 WDR38Q5JTN6 314 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 SLC36A1Q7Z2H8 476 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 MRPL21Q7Z2W9 205 aaKnown RBP9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 FAM122BQ7Z309 247 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 ACOT11Q8WXI4 607 aaPredicted RBP9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 ZNF570Q96NI8 536 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 EBF4Q9BQW3 602 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 DCTN5Q9BTE1 182 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 NUAK2Q9H093 628 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 MEGF9Q9H1U4 602 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 SERTAD4Q9NUC0 356 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 PRPF19Q9UMS4 504 aaKnown RBP9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 NDUFAF1Q9Y375 327 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 SF3B6Q9Y3B4 125 aaKnown RBP9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 LHFPL6Q9Y693 200 aa9.41□□□□□ -0.9
CCHCR1-219ENST00000505392 MEGF11A6BM72 1044 aa9.4□□□□□ -0.9
CCHCR1-219ENST00000505392 GGT3PA6NGU5 568 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms