RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 SYT6Q5T7P8 510 aaPredicted RBP4.34□□□□□ -1.72
NIPBL-204ENST00000504430 TMEM215Q68D42 235 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 TREML4Q6UXN2 200 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 GLT6D1Q7Z4J2 308 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 GPR32P1Q8NGA4 272 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 SYNPRQ8TBG9 265 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 TCEAL4Q96EI5 215 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 LINC00477Q96M19 166 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 Q96MT0 163 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 VAT1Q99536 393 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 CCDC90BQ9GZT6 254 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 MIXL1Q9H2W2 232 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 FZD1Q9UP38 647 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 GOLT1BQ9Y3E0 138 aa4.34□□□□□ -1.72
NIPBL-204ENST00000504430 CCDC182A6NF36 153 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 K7ESM1 405 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 CDC40O60508 579 aaKnown RBP eCLIP4.33□□□□□ -1.72
NIPBL-204ENST00000504430 COX5AP20674 150 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 OPRL1P41146 370 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 NAA20P61599 178 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 CD226Q15762 336 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 ATP1A1-AS1Q5TC04 95 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 OR8G2PQ6IF36 304 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 IDO2Q6ZQW0 420 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 TMEM135Q86UB9 458 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 OR4N5Q8IXE1 308 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 UBALD2Q8IYN6 164 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 METTL13Q8N6R0 699 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 ZNF441Q8N8Z8 693 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 TMEM161BQ8NDZ6 487 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 TNFAIP8L1Q8WVP5 186 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 C20orf173Q96LM9 149 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 YIPF3Q9GZM5 350 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 NMUR1Q9HB89 426 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 FAM206AQ9NX38 181 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 IL17CQ9P0M4 197 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 OR1A1Q9P1Q5 309 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 OR12D3Q9UGF7 316 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 ZNF223Q9UK11 482 aaPredicted RBP4.33□□□□□ -1.72
NIPBL-204ENST00000504430 MOKQ9UQ07 419 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 IGHV4-28A0A0C4DH34 117 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 BTNL10A8MVZ5 291 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 MFNGO00587 321 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 S1PR2O95136 353 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 SERPINA2P20848 420 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 ARG2P78540 354 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 RIGQ13278 110 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 KIR2DS3Q14952 304 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 SURF2Q15527 256 aaPredicted RBP4.33□□□□□ -1.72
NIPBL-204ENST00000504430 ZNF57Q68EA5 555 aaPredicted RBP4.33□□□□□ -1.72
NIPBL-204ENST00000504430 OR8J3Q8NGG0 315 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 OR2G2Q8NGZ5 317 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 RNASE11Q8TAA1 199 aaKnown RBP4.33□□□□□ -1.72
NIPBL-204ENST00000504430 TMEM234Q8WY98 164 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 YIPF5Q969M3 257 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 PPCDCQ96CD2 204 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 MRPL48Q96GC5 212 aaKnown RBP4.33□□□□□ -1.72
NIPBL-204ENST00000504430 NOL4LQ96MY1 436 aaPredicted RBP4.33□□□□□ -1.72
NIPBL-204ENST00000504430 SIGMAR1Q99720 223 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 DDA1Q9BW61 102 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 SPNS1Q9H2V7 528 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 LIME1Q9H400 295 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 SLC2A6Q9UGQ3 507 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 CD84Q9UIB8 345 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 SLC35A3Q9Y2D2 325 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 UTP11Q9Y3A2 253 aaKnown RBP4.33□□□□□ -1.72
NIPBL-204ENST00000504430 SAR1BQ9Y6B6 198 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 ZNF532Q9HCE3 1301 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 DCAF1Q9Y4B6 1507 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 TRIM49D1C9J1S8 452 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 SMKR1H3BMG3 65 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 CHP2O43745 196 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 IGHV2-5P01817 119 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 ADORA2BP29275 332 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 DLX6P56179 175 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 PSG4Q00888 419 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 ZNF266Q14584 549 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 NECTIN1Q15223 517 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 WDR74Q6RFH5 385 aaPredicted RBP4.33□□□□□ -1.72
NIPBL-204ENST00000504430 C10orf107Q8IVU9 208 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 FBXO25Q8TCJ0 367 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 DUX3Q96PT4 197 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 ARHGDIGQ99819 225 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 ENY2Q9NPA8 101 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 TMEM100Q9NV29 134 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 TMEM30AQ9NV96 361 aa4.33□□□□□ -1.72
NIPBL-204ENST00000504430 USP42Q9H9J4 1324 aaKnown RBP4.33□□□□□ -1.72
NIPBL-204ENST00000504430 IGLV9-49A0A0B4J1Y8 123 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 CLDN24A6NM45 220 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 GPR31O00270 319 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 SLC16A7O60669 478 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 OR9G9P0C7N8 305 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 HKR1P10072 659 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 PTGDSP41222 190 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 SEC61A1P61619 476 aaKnown RBP4.32□□□□□ -1.72
NIPBL-204ENST00000504430 ECH1Q13011 328 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 UNC119Q13432 240 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 PTGES3Q15185 160 aaKnown RBP4.32□□□□□ -1.72
NIPBL-204ENST00000504430 SPA17Q15506 151 aa4.32□□□□□ -1.72
NIPBL-204ENST00000504430 IGFL4Q6B9Z1 124 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms