RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 NLRC3Q7RTR2 1065 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 DCXRQ7Z4W1 244 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 ZNF511Q8NB15 262 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 ZNRF4Q8WWF5 429 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 COPS4Q9BT78 406 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 RBM4Q9BWF3 364 aaKnown RBP10.03□□□□□ -0.8
MED28-203ENST00000503945 CHID1Q9BWS9 393 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 DGCR6LQ9BY27 220 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 C1orf21Q9H246 121 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 NUP50Q9UKX7 468 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 LRCH1Q9Y2L9 728 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 INSIG2Q9Y5U4 225 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 A0A1B0GWJ7 208 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 RIIAD1A6NNX1 92 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 T-ENOLP0DO92 83 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 RPS2P15880 293 aaKnown RBP10.02□□□□□ -0.81
MED28-203ENST00000503945 ZNF12P17014 697 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 CA6P23280 308 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 PMELP40967 661 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 RPS27P42677 84 aaKnown RBP10.02□□□□□ -0.81
MED28-203ENST00000503945 ENTPD1P49961 510 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 PRKXP51817 358 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 SEC61A1P61619 476 aaKnown RBP10.02□□□□□ -0.81
MED28-203ENST00000503945 GNB2P62879 340 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 ZNF92Q03936 586 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 PAX8Q06710 450 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 MZT1Q08AG7 82 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 MAB21L1Q13394 359 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 GK3PQ14409 553 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 ARMCX4Q5H9R4 360 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 CD300LDQ6UXZ3 194 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 C3orf56Q8N813 242 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 SPERTQ8NA61 448 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 PLPP7Q8NBV4 271 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 DEFB108BQ8NET1 73 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 OR8D4Q8NGM9 314 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 OR9Q1Q8NGQ5 310 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 OR6K6Q8NGW6 343 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 GIPC3Q8TF64 312 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 RAB40AQ8WXH6 277 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 C22orf15Q8WYQ4 148 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 OTULINQ96BN8 352 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 ASB9Q96DX5 294 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 NEIL1Q96FI4 390 aaPredicted RBP10.02□□□□□ -0.81
MED28-203ENST00000503945 FEVQ99581 238 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 KCNJ15Q99712 375 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 SLC6A7Q99884 636 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 TMEM246Q9BRR3 403 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 SSBP3Q9BWW4 388 aaPredicted RBP10.02□□□□□ -0.81
MED28-203ENST00000503945 SP140LQ9H930 580 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 FN3KRPQ9HA64 309 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 UFSP2Q9NUQ7 469 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 TAS2R1Q9NYW7 299 aa10.02□□□□□ -0.81
MED28-203ENST00000503945 KIR2DS1A0A191URI9 304 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 A8MXK9 166 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 F5H0A9 414 aaPredicted RBP10.01□□□□□ -0.81
MED28-203ENST00000503945 H3BN98 237 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 KCNAB3O43448 404 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 CST1P01037 141 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 APOC1P02654 83 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 GYPBP06028 91 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 ZNF3P17036 446 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 HOXB6P17509 224 aaKnown RBP10.01□□□□□ -0.81
MED28-203ENST00000503945 SPI1P17947 270 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 CD80P33681 288 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 DDOSTP39656 456 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 CD200P41217 278 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 PRSS12P56730 875 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 GRB2P62993 217 aaKnown RBP10.01□□□□□ -0.81
MED28-203ENST00000503945 CRMP1Q14194 572 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 KCNJ8Q15842 424 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 PCK2Q16822 640 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 ZNF404Q494X3 552 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 KLBQ86Z14 1044 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 OR10G2Q8NGC3 310 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 OR8B3Q8NGG8 313 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 OR10S1Q8NGN2 331 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 OR4Q3Q8NH05 313 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 SGMS2Q8NHU3 365 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 TEX47Q8TBZ9 253 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 Q8TCH9 128 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 DVL3Q92997 716 aaPredicted RBP10.01□□□□□ -0.81
MED28-203ENST00000503945 SLAMF6Q96DU3 332 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 OR8B2Q96RD0 313 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 THTPAQ9BU02 230 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 NMNAT2Q9BZQ4 307 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 MS4A7Q9GZW8 240 aaPredicted RBP10.01□□□□□ -0.81
MED28-203ENST00000503945 ZNF556Q9HAH1 456 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 ARMC1Q9NVT9 282 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 MRPL15Q9P015 296 aaKnown RBP10.01□□□□□ -0.81
MED28-203ENST00000503945 RNF7Q9UBF6 113 aa10.01□□□□□ -0.81
MED28-203ENST00000503945 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10□□□□□ -0.81
MED28-203ENST00000503945 SOX14O95416 240 aa10□□□□□ -0.81
MED28-203ENST00000503945 HMGN1P05114 100 aa10□□□□□ -0.81
MED28-203ENST00000503945 GRPP07492 148 aa10□□□□□ -0.81
MED28-203ENST00000503945 PPIAL4GP0DN37 164 aa10□□□□□ -0.81
MED28-203ENST00000503945 PAICSP22234 425 aaKnown RBP10□□□□□ -0.81
MED28-203ENST00000503945 POU1F1P28069 291 aa10□□□□□ -0.81
MED28-203ENST00000503945 HSD11B1P28845 292 aa10□□□□□ -0.81
MED28-203ENST00000503945 OTX1P32242 354 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms