RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 J3KTA2 159 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 SOCS2O14508 198 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 FCN3O75636 299 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 LCATP04180 440 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 ACSM4P0C7M7 580 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 EEF1B2P24534 225 aaKnown RBP11.45□□□□□ -0.58
CCDC58-207ENST00000498466 HIST1H3AP68431 136 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 GUCA2AQ02747 115 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 PRB3Q04118 309 aaPredicted RBP11.45□□□□□ -0.58
CCDC58-207ENST00000498466 DBPQ10586 325 aaPredicted RBP11.45□□□□□ -0.58
CCDC58-207ENST00000498466 KCNMB1Q16558 191 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 RSPO1Q2MKA7 263 aaPredicted RBP11.45□□□□□ -0.58
CCDC58-207ENST00000498466 C11orf91Q3C1V1 193 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 OXLD1Q5BKU9 147 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 HIST2H3PS2Q5TEC6 136 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 PGM2L1Q6PCE3 622 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 TBPL2Q6SJ96 375 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 MBOAT2Q6ZWT7 520 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 HIST2H3AQ71DI3 136 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 MRPL21Q7Z2W9 205 aaKnown RBP11.45□□□□□ -0.58
CCDC58-207ENST00000498466 FAM90A1Q86YD7 464 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 PLPP7Q8NBV4 271 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 OR5R1Q8NH85 324 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 ACOT11Q8WXI4 607 aaPredicted RBP11.45□□□□□ -0.58
CCDC58-207ENST00000498466 SGCDQ92629 289 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 PITX2Q99697 317 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 TOR3AQ9H497 397 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 SIRT7Q9NRC8 400 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 RAB21Q9UL25 225 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 FOXJ3Q9UPW0 622 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 AURKCQ9UQB9 309 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 SIGLEC9Q9Y336 463 aa11.45□□□□□ -0.58
CCDC58-207ENST00000498466 DNAH3Q8TD57 4116 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 IGHV3OR15-7A0A075B7D8 119 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 A0A087WUU8 490 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 A6NLC8 198 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 NPFFO15130 113 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 GMDSO60547 372 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 GRPP07492 148 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 KDELR2P33947 212 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 SELENOWP63302 87 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 GPR139Q6DWJ6 353 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 METAP1DQ6UB28 335 aaPredicted RBP11.44□□□□□ -0.58
CCDC58-207ENST00000498466 C1orf122Q6ZSJ8 110 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 ZNF826PQ6ZT77 177 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 PTCHD4Q6ZW05 846 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 TMPRSS11FQ6ZWK6 438 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 RRM2BQ7LG56 351 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 ADCK1Q86TW2 530 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 NAA40Q86UY6 237 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 CMTM4Q8IZR5 234 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 FGFRL1Q8N441 504 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 SPERTQ8NA61 448 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 OR8J3Q8NGG0 315 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 TSSK2Q96PF2 358 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 ATF6BQ99941 703 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 TMBIM4Q9HC24 238 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 NECAP2Q9NVZ3 263 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 SNX13Q9Y5W8 968 aa11.44□□□□□ -0.58
CCDC58-207ENST00000498466 MEIOCA2RUB1 952 aa11.43□□□□□ -0.58
CCDC58-207ENST00000498466 CD300LBA8K4G0 201 aa11.43□□□□□ -0.58
CCDC58-207ENST00000498466 RNASEK-C17orf49H0YIS7 233 aa11.43□□□□□ -0.58
CCDC58-207ENST00000498466 FFAR1O14842 300 aa11.43□□□□□ -0.58
CCDC58-207ENST00000498466 NDUFB2O95178 105 aa11.43□□□□□ -0.58
CCDC58-207ENST00000498466 PTBP3O95758 552 aaKnown RBP11.43□□□□□ -0.58
CCDC58-207ENST00000498466 IFNW1P05000 195 aa11.43□□□□□ -0.58
CCDC58-207ENST00000498466 CRABP1P29762 137 aa11.43□□□□□ -0.58
CCDC58-207ENST00000498466 GGT2P36268 569 aa11.43□□□□□ -0.58
CCDC58-207ENST00000498466 MDH1P40925 334 aaKnown RBP11.43□□□□□ -0.58
CCDC58-207ENST00000498466 TRAP1Q12931 704 aaKnown RBP11.43□□□□□ -0.58
CCDC58-207ENST00000498466 KRTAP27-1Q3LI81 207 aa11.43□□□□□ -0.58
CCDC58-207ENST00000498466 VAX1Q5SQQ9 334 aa11.43□□□□□ -0.58
CCDC58-207ENST00000498466 DNM1P34Q6PK57 102 aa11.43□□□□□ -0.58
CCDC58-207ENST00000498466 CFAP77Q6ZQR2 320 aa11.43□□□□□ -0.58
CCDC58-207ENST00000498466 LINC00346Q8IVM7 164 aa11.43□□□□□ -0.58
CCDC58-207ENST00000498466 GCSAMQ8N6F7 178 aa11.43□□□□□ -0.58
CCDC58-207ENST00000498466 ITPKCQ96DU7 683 aa11.43□□□□□ -0.58
CCDC58-207ENST00000498466 NRIP3Q9NQ35 241 aa11.43□□□□□ -0.58
CCDC58-207ENST00000498466 AURKAIP1Q9NWT8 199 aaPredicted RBP11.43□□□□□ -0.58
CCDC58-207ENST00000498466 KAAG1Q9UBP8 84 aa11.43□□□□□ -0.58
CCDC58-207ENST00000498466 IER3IP1Q9Y5U9 82 aa11.43□□□□□ -0.58
CCDC58-207ENST00000498466 A0A1B0GW55 424 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 GGT3PA6NGU5 568 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 DCTN6O00399 190 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 XPNPEP2O43895 674 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 DUX4L2P0CJ85 424 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 DUX4L3P0CJ86 424 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 DUX4L4P0CJ87 422 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 DUX4L5P0CJ88 424 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 DUX4L6P0CJ89 424 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 DUX4L7P0CJ90 424 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 CDKN2AP42771 156 aaKnown RBP11.42□□□□□ -0.58
CCDC58-207ENST00000498466 EFNB2P52799 333 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 DLX1P56177 255 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 TPTEP56180 551 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 ECH1Q13011 328 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 KLRD1Q13241 179 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 TEX36Q5VZQ5 186 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 C11orf88Q6PI97 169 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 DUX4L9Q6RFH8 374 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms