RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 MYCBPQ99417 103 aaPredicted RBP13.81□□□□□ -0.2
PTK7-220ENST00000497957 GPR84Q9NQS5 396 aa13.81□□□□□ -0.2
PTK7-220ENST00000497957 CRIM1Q9NZV1 1036 aa13.81□□□□□ -0.2
PTK7-220ENST00000497957 CRNNQ9UBG3 495 aaPredicted RBP13.81□□□□□ -0.2
PTK7-220ENST00000497957 STARD10Q9Y365 291 aa13.81□□□□□ -0.2
PTK7-220ENST00000497957 KALRNO60229 2985 aa13.81□□□□□ -0.2
PTK7-220ENST00000497957 PCNX1Q96RV3 2341 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 NBASA2RRP1 2371 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 A0A1W2PPW3 197 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 IGLV3-1P01715 115 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 FAM157BP0CG42 384 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 PSMA1P25786 263 aaKnown RBP13.8□□□□□ -0.2
PTK7-220ENST00000497957 PCSK6P29122 969 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 TFF3Q07654 80 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 TNK1Q13470 666 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 CNPY1Q3B7I2 92 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 COLCA1Q6ZS62 124 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 CCDC36Q8IYA8 594 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 DGCR14Q96DF8 476 aaKnown RBP13.8□□□□□ -0.2
PTK7-220ENST00000497957 KCNS3Q9BQ31 491 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 C1QTNF5Q9BXJ0 243 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 COMMD4Q9H0A8 199 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 PPP1R3EQ9H7J1 279 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 NOX4Q9NPH5 578 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 PTTG3PQ9NZH4 202 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 ATPIF1Q9UII2 106 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 SSR3Q9UNL2 185 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 CFAP46Q8IYW2 2715 aa13.8□□□□□ -0.2
PTK7-220ENST00000497957 TRBV5-7A0A0A0MS05 114 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 ZNF879B4DU55 563 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 GPRIN2O60269 458 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 CD53P19397 219 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 ACHEP22303 614 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 CAV3P56539 151 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 ZNF92Q03936 586 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 HLXQ14774 488 aaPredicted RBP13.79□□□□□ -0.2
PTK7-220ENST00000497957 FBXL19-AS1Q494R0 122 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 ZMAT1Q5H9K5 638 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 DMRTC1Q5HYR2 192 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 TMEM255AQ5JRV8 349 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 SPATA46Q5T0L3 261 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 OR1J2Q8NGS2 313 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 CA5BP1Q8WTZ4 195 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 RAB2BQ8WUD1 216 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 RNASE6Q93091 150 aaKnown RBP13.79□□□□□ -0.2
PTK7-220ENST00000497957 DERL3Q96Q80 235 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 NKX3-1Q99801 234 aaPredicted RBP13.79□□□□□ -0.2
PTK7-220ENST00000497957 FAM192AQ9GZU8 254 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 CDH20Q9HBT6 801 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 NPDC1Q9NQX5 325 aaPredicted RBP13.79□□□□□ -0.2
PTK7-220ENST00000497957 NDUFA13Q9P0J0 144 aa13.79□□□□□ -0.2
PTK7-220ENST00000497957 TRAV8-7A0A075B6U6 113 aa13.78□□□□□ -0.2
PTK7-220ENST00000497957 IGHV2OR16-5A0A0B4J2B6 119 aa13.78□□□□□ -0.2
PTK7-220ENST00000497957 NCR1O76036 304 aa13.78□□□□□ -0.2
PTK7-220ENST00000497957 HLA-DPB1P04440 258 aa13.78□□□□□ -0.2
PTK7-220ENST00000497957 ZNF35P13682 527 aa13.78□□□□□ -0.2
PTK7-220ENST00000497957 SERPINB10P48595 397 aa13.78□□□□□ -0.2
PTK7-220ENST00000497957 TBC1D28Q2M2D7 210 aa13.78□□□□□ -0.2
PTK7-220ENST00000497957 YIF1BQ5BJH7 314 aa13.78□□□□□ -0.2
PTK7-220ENST00000497957 ZNF704Q6ZNC4 412 aaPredicted RBP13.78□□□□□ -0.2
PTK7-220ENST00000497957 COMMD2Q86X83 199 aa13.78□□□□□ -0.2
PTK7-220ENST00000497957 OR14K1Q8NGZ2 314 aa13.78□□□□□ -0.2
PTK7-220ENST00000497957 ZNF420Q8TAQ5 688 aaPredicted RBP13.78□□□□□ -0.2
PTK7-220ENST00000497957 TSEN15Q8WW01 171 aaKnown RBP13.78□□□□□ -0.2
PTK7-220ENST00000497957 ADAT3Q96EY9 351 aaPredicted RBP13.78□□□□□ -0.2
PTK7-220ENST00000497957 REEP6Q96HR9 211 aa13.78□□□□□ -0.2
PTK7-220ENST00000497957 DCUN1D5Q9BTE7 237 aa13.78□□□□□ -0.2
PTK7-220ENST00000497957 OR10A2Q9H208 303 aa13.78□□□□□ -0.2
PTK7-220ENST00000497957 MOB1AQ9H8S9 216 aa13.78□□□□□ -0.2
PTK7-220ENST00000497957 OBP2BQ9NPH6 170 aa13.78□□□□□ -0.2
PTK7-220ENST00000497957 DPRXA6NFQ7 191 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 C19orf84I3L1E1 186 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 SYT7O43581 403 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 SMPD2O60906 423 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 ISG15P05161 165 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 UCHL1P09936 223 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 OCM2P0CE71 109 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 UBCP0CG48 685 aaKnown RBP13.77□□□□□ -0.21
PTK7-220ENST00000497957 CCL1P22362 96 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 ACKR3P25106 362 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 CALRP27797 417 aaKnown RBP13.77□□□□□ -0.21
PTK7-220ENST00000497957 NAAAQ02083 359 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 MXD1Q05195 221 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 SRSF1Q07955 248 aaKnown RBP eCLIP13.77□□□□□ -0.21
PTK7-220ENST00000497957 MSMPQ1L6U9 139 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 TMEM244Q5VVB8 128 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 ZNF544Q6NX49 715 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 RNF144BQ7Z419 303 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 NR2C2APQ86WQ0 139 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 MS4A15Q8N5U1 240 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 OR13C3Q8NGS6 347 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 HAVCR2Q8TDQ0 301 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 GPR148Q8TDV2 347 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 FGGYQ96C11 551 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 MUCL1Q96DR8 90 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 GFI1Q99684 422 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 SLC30A2Q9BRI3 323 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 KCNJ16Q9NPI9 418 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 TAS2R4Q9NYW5 299 aa13.77□□□□□ -0.21
PTK7-220ENST00000497957 HHLA2Q9UM44 414 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms