RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 TMEM184BQ9Y519 407 aaPredicted RBP10.45□□□□□ -0.74
HDAC4-210ENST00000493582 FANCMQ8IYD8 2048 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 K7EPK0 472 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 BCAT2O15382 392 aaPredicted RBP10.45□□□□□ -0.74
HDAC4-210ENST00000493582 SNRPCP09234 159 aaKnown RBP10.45□□□□□ -0.74
HDAC4-210ENST00000493582 CXCL1P09341 107 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 SPARCP09486 303 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 SLC35G6P0C7Q6 338 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 IGFBP3P17936 291 aaPredicted RBP10.45□□□□□ -0.74
HDAC4-210ENST00000493582 CLDN6P56747 220 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 TAS2R31P59538 309 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 RPL18Q07020 188 aaKnown RBP10.45□□□□□ -0.74
HDAC4-210ENST00000493582 UNC119Q13432 240 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 LCN10Q6JVE6 187 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 FBXO42Q6P3S6 717 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 FAM71E2Q8N5Q1 922 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 ZNF610Q8N9Z0 462 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 KDF1Q8NAX2 398 aaPredicted RBP10.45□□□□□ -0.74
HDAC4-210ENST00000493582 POC1AQ8NBT0 407 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 OR13C3Q8NGS6 347 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 CNTD2Q9H8S5 307 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 GPR132Q9UNW8 380 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 HIF3AQ9Y2N7 669 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 UNC80Q8N2C7 3258 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 A0A0A6YYH2 397 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 A6NJ64 397 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 NKX2-2O95096 273 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 THBS4P35443 961 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 ZNF74Q16587 644 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 FAM78AQ5JUQ0 283 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 ADAMTSL4Q6UY14 1074 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 AVL9Q8NBF6 648 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 CNTNAP3Q9BZ76 1288 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 SLC35B3Q9H1N7 401 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.44□□□□□ -0.74
HDAC4-210ENST00000493582 SEC14L6B5MCN3 397 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 FKTNO75072 461 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 JTBO76095 146 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 CD37P11049 281 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 ZNF708P17019 499 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 GLRA1P23415 457 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 CCR4P51679 360 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 CEBPGP53567 150 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 DHCR24Q15392 516 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 SFTPA1Q8IWL2 248 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 ERGIC1Q969X5 290 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 MUCL1Q96DR8 90 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 BSCL2Q96G97 398 aaPredicted RBP10.44□□□□□ -0.74
HDAC4-210ENST00000493582 SERINC2Q96SA4 455 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 S100A13Q99584 98 aa10.44□□□□□ -0.74
HDAC4-210ENST00000493582 A0A1B0GWJ7 208 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 METTL12A8MUP2 240 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 PRRT4C9JH25 899 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 HRKO00198 91 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 PPP1R2P9O14990 202 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 PET100P0DJ07 73 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 MAS1LP35410 378 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 CAMLGP49069 296 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 ADPRHP54922 357 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 SLC26A5P58743 744 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 IL15RAQ13261 267 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 ENPP2Q13822 863 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 RPUSD3Q6P087 351 aaKnown RBP10.43□□□□□ -0.74
HDAC4-210ENST00000493582 MED25Q71SY5 747 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 HIST3H2BBQ8N257 126 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 Q8WTZ3 238 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 RARRES2Q99969 163 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 NICN1Q9BSH3 213 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 UBQLN4Q9NRR5 601 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 FAM212BQ9NTI7 297 aaPredicted RBP10.43□□□□□ -0.74
HDAC4-210ENST00000493582 TRBV23OR9-2A0A075B6M9 112 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 LOC390937A0A1W2PQ73 354 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 GMFGO60234 142 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 CTSVO60911 334 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 GPR75O95800 540 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 RENP00797 406 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 PRH1P02810 166 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 TRGC2P03986 189 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 C8AP07357 584 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 CST5P28325 142 aaPredicted RBP10.43□□□□□ -0.74
HDAC4-210ENST00000493582 FDX2Q6P4F2 183 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 DPPA2Q7Z7J5 298 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 THRSPQ92748 146 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 GALNT14Q96FL9 552 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 ATG101Q9BSB4 218 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 C2orf88Q9BSF0 95 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 RTBDNQ9BSG5 229 aaPredicted RBP10.43□□□□□ -0.74
HDAC4-210ENST00000493582 C8orf33Q9H7E9 229 aaPredicted RBP10.43□□□□□ -0.74
HDAC4-210ENST00000493582 MMP25Q9NPA2 562 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 RAB22AQ9UL26 194 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 EMC9Q9Y3B6 208 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 INSL6Q9Y581 213 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 MYO7AQ13402 2215 aa10.43□□□□□ -0.74
HDAC4-210ENST00000493582 C11orf98E9PRG8 122 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 ZNF264O43296 627 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 NUDT21O43809 227 aaKnown RBP10.42□□□□□ -0.74
HDAC4-210ENST00000493582 COX5BP10606 129 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 RAB1AP62820 205 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 OR8G1Q15617 311 aa10.42□□□□□ -0.74
HDAC4-210ENST00000493582 TCEAL5Q5H9L2 206 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms