RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 CLN6Q9NWW5 311 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 AHSPQ9NZD4 102 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 RABL2AQ9UBK7 228 aaPredicted RBP2.3□□□□□ -2.04
CLK1-213ENST00000492793 DDX19BQ9UMR2 479 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 MROH7Q68CQ1 1323 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 COL4A4P53420 1690 aaPredicted RBP2.3□□□□□ -2.04
CLK1-213ENST00000492793 TNS2Q63HR2 1409 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 IGKV1-8A0A0C4DH67 115 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 TMEM120BA0PK00 339 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 H0YJW9 148 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 BCKDKO14874 412 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 RRP8O43159 456 aaKnown RBP2.29□□□□□ -2.04
CLK1-213ENST00000492793 EIF1BO60739 113 aaKnown RBP2.29□□□□□ -2.04
CLK1-213ENST00000492793 SLC19A2O60779 497 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 CCNE2O96020 404 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 ME2P23368 584 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 EIF1P41567 113 aaKnown RBP2.29□□□□□ -2.04
CLK1-213ENST00000492793 MAGEA1P43355 309 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 SERPINB8P50452 374 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 RPS15AP62244 130 aaKnown RBP2.29□□□□□ -2.04
CLK1-213ENST00000492793 RAD51Q06609 339 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 CDC20Q12834 499 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 SHHQ15465 462 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 GABRA6Q16445 453 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 ZNF829Q3KNS6 432 aaPredicted RBP2.29□□□□□ -2.04
CLK1-213ENST00000492793 SLC16A13Q7RTY0 426 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 NEGR1Q7Z3B1 354 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 NECAP1Q8NC96 275 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 TTLQ8NG68 377 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 OR1J4Q8NGS1 313 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 OR13G1Q8NGZ3 307 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 OR52P1PQ8NH57 321 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 OR10G6Q8NH81 332 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 RERGQ96A58 199 aaPredicted RBP2.29□□□□□ -2.04
CLK1-213ENST00000492793 RNF5Q99942 180 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 ZNF2Q9BSG1 426 aaPredicted RBP2.29□□□□□ -2.04
CLK1-213ENST00000492793 KRTAP4-3Q9BYR4 195 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 LYRM4Q9HD34 91 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 CHRAC1Q9NRG0 131 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 RGS18Q9NS28 235 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 SLC17A7Q9P2U7 560 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 GGA2Q9UJY4 613 aa2.29□□□□□ -2.04
CLK1-213ENST00000492793 YARS2Q9Y2Z4 477 aaKnown RBP2.29□□□□□ -2.04
CLK1-213ENST00000492793 WDR19Q8NEZ3 1342 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 PCDH11XQ9BZA7 1347 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 TRAV25A0A0B4J276 109 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 A0A1W2PRD5 423 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 A6NDN8 102 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 NCF1BA6NI72 391 aaPredicted RBP2.28□□□□□ -2.04
CLK1-213ENST00000492793 ZNF850A8MQ14 1090 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 PDZK1P1A8MUH7 402 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 NCF1CA8MVU1 366 aaPredicted RBP2.28□□□□□ -2.04
CLK1-213ENST00000492793 POLR1CO15160 346 aaPredicted RBP2.28□□□□□ -2.04
CLK1-213ENST00000492793 CHMP2AO43633 222 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 ZNF207O43670 478 aaKnown RBP2.28□□□□□ -2.04
CLK1-213ENST00000492793 STAG3L3P0CL85 134 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 GGT2P36268 569 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 NBL1P41271 181 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 GPR1P46091 355 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 NDUFA8P51970 172 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 IRF8Q02556 426 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 ZNF33AQ06730 810 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 TFDP2Q14188 446 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 GCSAMLQ5JQS6 135 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 LCE3AQ5TA76 89 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 TTC19Q6DKK2 380 aaPredicted RBP2.28□□□□□ -2.04
CLK1-213ENST00000492793 BHLHA15Q7RTS1 189 aaPredicted RBP2.28□□□□□ -2.04
CLK1-213ENST00000492793 TMCO2Q7Z6W1 182 aaPredicted RBP2.28□□□□□ -2.04
CLK1-213ENST00000492793 HMGN2P46Q86SG4 172 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 MDP1Q86V88 176 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 UNC93AQ86WB7 457 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 MYOCDQ8IZQ8 938 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 OR51F2Q8NH61 342 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 ESR2Q92731 530 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 RPEQ96AT9 228 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 RMI2Q96E14 147 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 SULT4A1Q9BR01 284 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 TIMM29Q9BSF4 260 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 TMEM243Q9BU79 118 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 GGTLC1Q9BX51 225 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 MRPS30Q9NP92 439 aaKnown RBP2.28□□□□□ -2.04
CLK1-213ENST00000492793 CAB39Q9Y376 341 aaPredicted RBP2.28□□□□□ -2.04
CLK1-213ENST00000492793 HES2Q9Y543 173 aa2.28□□□□□ -2.04
CLK1-213ENST00000492793 BAZ2AQ9UIF9 1905 aaKnown RBP2.28□□□□□ -2.04
CLK1-213ENST00000492793 TRAV6A0A075B6T7 132 aa2.27□□□□□ -2.05
CLK1-213ENST00000492793 KRBOX1C9JBD0 128 aa2.27□□□□□ -2.05
CLK1-213ENST00000492793 XRCC2O43543 280 aa2.27□□□□□ -2.05
CLK1-213ENST00000492793 HSBP1O75506 76 aa2.27□□□□□ -2.05
CLK1-213ENST00000492793 TDP2O95551 362 aa2.27□□□□□ -2.05
CLK1-213ENST00000492793 PAHP00439 452 aa2.27□□□□□ -2.05
CLK1-213ENST00000492793 GLAP06280 429 aa2.27□□□□□ -2.05
CLK1-213ENST00000492793 PGA4P0DJD7 388 aa2.27□□□□□ -2.05
CLK1-213ENST00000492793 PGA3P0DJD8 388 aa2.27□□□□□ -2.05
CLK1-213ENST00000492793 PGA5P0DJD9 388 aa2.27□□□□□ -2.05
CLK1-213ENST00000492793 RAB5AP20339 215 aa2.27□□□□□ -2.05
CLK1-213ENST00000492793 PFN2P35080 140 aa2.27□□□□□ -2.05
CLK1-213ENST00000492793 FABP6P51161 128 aa2.27□□□□□ -2.05
CLK1-213ENST00000492793 AP1S2P56377 157 aa2.27□□□□□ -2.05
CLK1-213ENST00000492793 PPIDQ08752 370 aaKnown RBP2.27□□□□□ -2.05
CLK1-213ENST00000492793 DNAJC3Q13217 504 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms