RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 RNF224P0DH78 156 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 CD53P19397 219 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 NR4A1P22736 598 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 GLRXP35754 106 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 SLC3A1Q07837 685 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 SRSF1Q07955 248 aaKnown RBP eCLIP9.46□□□□□ -0.9
VARS2-210ENST00000490699 MFGE8Q08431 387 aaPredicted RBP9.46□□□□□ -0.9
VARS2-210ENST00000490699 DAZAP2Q15038 168 aaPredicted RBP9.46□□□□□ -0.9
VARS2-210ENST00000490699 CDK5R1Q15078 307 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 TIMM50Q3ZCQ8 353 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 ZMAT1Q5H9K5 638 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 ARMCX4Q5H9R4 360 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 WDR38Q5JTN6 314 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 LCE2AQ5TA79 106 aaPredicted RBP9.46□□□□□ -0.9
VARS2-210ENST00000490699 SP5Q6BEB4 398 aaPredicted RBP9.46□□□□□ -0.9
VARS2-210ENST00000490699 VHLLQ6RSH7 139 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 TREML4Q6UXN2 200 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 DOK3Q7L591 496 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 ELMOD2Q8IZ81 293 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 MS4A15Q8N5U1 240 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 OR8B12Q8NGG6 310 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 REEP6Q96HR9 211 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 OR5M11Q96RB7 305 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 KRTAP4-6Q9BYQ5 205 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 NEK6Q9HC98 313 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 PTTG3PQ9NZH4 202 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 FBXO9Q9UK97 447 aaPredicted RBP9.46□□□□□ -0.9
VARS2-210ENST00000490699 HHLA2Q9UM44 414 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 NOP16Q9Y3C1 178 aaKnown RBP9.46□□□□□ -0.9
VARS2-210ENST00000490699 CMAHPQ9Y471 501 aa9.46□□□□□ -0.9
VARS2-210ENST00000490699 A0A1W2PPW3 197 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 PLSCR5A0PG75 271 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 CCRL2O00421 344 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 NOL3O60936 208 aaKnown RBP9.45□□□□□ -0.9
VARS2-210ENST00000490699 OCM2P0CE71 109 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 OCMP0CE72 109 aaPredicted RBP9.45□□□□□ -0.9
VARS2-210ENST00000490699 BMP4P12644 408 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 ZNF20P17024 532 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 ACHEP22303 614 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 MAPK3P27361 379 aaPredicted RBP9.45□□□□□ -0.9
VARS2-210ENST00000490699 CALCRP30988 508 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 TTKP33981 857 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 DDOSTP39656 456 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 WNT5AP41221 380 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 MAP2K3P46734 347 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 KLF3P57682 345 aaPredicted RBP9.45□□□□□ -0.9
VARS2-210ENST00000490699 TSTQ16762 297 aaKnown RBP9.45□□□□□ -0.9
VARS2-210ENST00000490699 ODF4Q2M2E3 257 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 SNAI3Q3KNW1 292 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 YIF1BQ5BJH7 314 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 LIPKQ5VXJ0 399 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 C22orf34Q6ZV56 151 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 RFPL4BQ6ZWI9 263 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 MYPOPQ86VE0 399 aaPredicted RBP9.45□□□□□ -0.9
VARS2-210ENST00000490699 ZNF101Q8IZC7 436 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 FBXL14Q8N1E6 418 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 PAQR4Q8N4S7 273 aaPredicted RBP9.45□□□□□ -0.9
VARS2-210ENST00000490699 CSNK2A3Q8NEV1 391 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 OR13C3Q8NGS6 347 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 SYNPRQ8TBG9 265 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 OR51E1Q8TCB6 317 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 GPR148Q8TDV2 347 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 ZNF649Q9BS31 505 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 ZNF442Q9H7R0 627 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 CA10Q9NS85 328 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 FRRS1LQ9P0K9 344 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 CKLFQ9UBR5 152 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 CGGBP1Q9UFW8 167 aaPredicted RBP9.45□□□□□ -0.9
VARS2-210ENST00000490699 EDARQ9UNE0 448 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 DHDHQ9UQ10 334 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 ZNF281Q9Y2X9 895 aa9.45□□□□□ -0.9
VARS2-210ENST00000490699 LSM2Q9Y333 95 aaKnown RBP9.45□□□□□ -0.9
VARS2-210ENST00000490699 LOC107986453A0A1B0GWG9 222 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 ANKRD30BLA7E2S9 258 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 DEFB108AA8MXU0 73 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 P2RY10O00398 339 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 OGG1O15527 345 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 PLPP2O43688 288 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 TIMM8AO60220 97 aaPredicted RBP9.44□□□□□ -0.9
VARS2-210ENST00000490699 SRSF10O75494 262 aaKnown RBP9.44□□□□□ -0.9
VARS2-210ENST00000490699 CLDN1O95832 211 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 PNPP00491 289 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 HLA-DPB1P04440 258 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 ISG15P05161 165 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 CD1AP06126 327 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 ADRA2AP08913 450 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 RAC2P15153 192 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 CPEP16870 476 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 PCMT1P22061 227 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 GNALP38405 381 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 FABP6P51161 128 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 GTF2A1P52655 376 aaPredicted RBP9.44□□□□□ -0.9
VARS2-210ENST00000490699 SPOCK1Q08629 439 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 GLYATL3Q5SZD4 288 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 SPATA46Q5T0L3 261 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 SYT6Q5T7P8 510 aaPredicted RBP9.44□□□□□ -0.9
VARS2-210ENST00000490699 DMKNQ6E0U4 476 aaPredicted RBP9.44□□□□□ -0.9
VARS2-210ENST00000490699 PAMR1Q6UXH9 720 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 COLCA1Q6ZS62 124 aa9.44□□□□□ -0.9
VARS2-210ENST00000490699 GPR141Q7Z602 305 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms