RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 KLHL28Q9NXS3 571 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 AHSPQ9NZD4 102 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 USP36Q9P275 1121 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 SEMA5BQ9P283 1151 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 GRHPRQ9UBQ7 328 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC25A13Q9UJS0 675 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF346Q9UL40 294 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 KCNK6Q9Y257 313 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 HTTP42858 3142 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 TRBV5-5A0A0J9YX44 114 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 TRBV11-1A0A0K0K1C0 115 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 A0A0U1RQV5 110 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 PPP5D1E7EU14 171 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 H3BNC9 293 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 K7EPK0 472 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 CDC42EP2O14613 210 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 DOK2O60496 412 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 SLCO2B1O94956 709 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC16A8O95907 504 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 PPBPP02775 128 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 LGALS2P05162 132 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 ERCC1P07992 297 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC35G6P0C7Q6 338 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 PGA4P0DJD7 388 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 PGA3P0DJD8 388 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 PGA5P0DJD9 388 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 FGF5P12034 268 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 IRF2P14316 349 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 TACR2P21452 398 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 IGFBP6P24592 240 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 TLX1P31314 330 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 GALNSP34059 522 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 GJA4P35212 333 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 LTBRP36941 435 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 GABRA4P48169 554 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 OR5I1Q13606 314 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 GGTLC2Q14390 218 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 PDCD1Q15116 288 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 EBPQ15125 230 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 METRNLQ641Q3 311 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 TANGO2Q6ICL3 276 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF343Q6P1L6 599 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 LEG1Q6P5S2 330 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 TEX38Q6PEX7 206 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF705AQ6ZN79 300 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 TMPPEQ6ZT21 453 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 NUFIP2Q7Z417 695 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 C17orf64Q86WR6 236 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC35F2Q8IXU6 374 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 C1orf87Q8N0U7 546 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 FAM71E2Q8N5Q1 922 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 OR2L3Q8NG85 312 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 OR2AP1Q8NGE2 309 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 OR1P1Q8NH06 330 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 CASTOR1Q8WTX7 329 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC25A43Q8WUT9 341 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 DNASE2BQ8WZ79 361 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 SUSD6Q92537 303 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 ANKRD9Q96BM1 317 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 TVP23CQ96ET8 276 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF764Q96H86 408 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 THOC3Q96J01 351 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC35G5Q96KT7 338 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 C5orf34Q96MH7 638 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 PRAP1Q96NZ9 151 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 MCHR1Q99705 422 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 MIEN1Q9BRT3 115 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 G6PC3Q9BUM1 346 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 EFCAB11Q9BUY7 163 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 ANGPTL4Q9BY76 406 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 COMMD4Q9H0A8 199 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 OR5AC2Q9NZP5 309 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 CHRNA9Q9UGM1 479 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 CD84Q9UIB8 345 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 MSRAQ9UJ68 235 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF223Q9UK11 482 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 RLFQ13129 1914 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 CENPFP49454 3210 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 PLXNA4Q9HCM2 1894 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 BPTFQ12830 3046 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 GREB1Q4ZG55 1949 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 MTCL1Q9Y4B5 1905 aaKnown RBP4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 IGLV3-16A0A075B6K0 115 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 TRBV24-1A0A075B6N3 115 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 TRBV5-7A0A0A0MS05 114 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 A0A0A6YYH2 397 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 A6NJ64 397 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 DHRS7CA6NNS2 312 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 FTCDNL1E5RQL4 147 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 F5H5T6 163 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 SAP18O00422 153 aaKnown RBP4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 PTGESO14684 152 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 HSD17B6O14756 317 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 RPP14O95059 124 aaKnown RBP4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 ZFPL1O95159 310 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 NTN1O95631 604 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 IGLV3-27P01718 113 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 TACSTD2P09758 323 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 OR4A8P0C604 315 aa4.26□□□□□ -1.73
SNRNP40-206ENST00000489853 HMGB2P26583 209 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms