RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 CCL2P13500 99 aa18.12■□□□□ 0.49
SND1-214ENST00000489417 CCNOP22674 350 aa18.12■□□□□ 0.49
SND1-214ENST00000489417 SOX6P35712 828 aa18.12■□□□□ 0.49
SND1-214ENST00000489417 IDH3GP51553 393 aaPredicted RBP18.12■□□□□ 0.49
SND1-214ENST00000489417 TBC1D28Q2M2D7 210 aa18.12■□□□□ 0.49
SND1-214ENST00000489417 TIMM23BQ5SRD1 257 aa18.12■□□□□ 0.49
SND1-214ENST00000489417 TPRA1Q86W33 373 aa18.12■□□□□ 0.49
SND1-214ENST00000489417 S100PBPQ96BU1 408 aa18.12■□□□□ 0.49
SND1-214ENST00000489417 FAM71F1Q96KD3 344 aaPredicted RBP18.12■□□□□ 0.49
SND1-214ENST00000489417 LYZL4Q96KX0 146 aa18.12■□□□□ 0.49
SND1-214ENST00000489417 TPK1Q9H3S4 243 aa18.12■□□□□ 0.49
SND1-214ENST00000489417 SLC25A15Q9Y619 301 aa18.12■□□□□ 0.49
SND1-214ENST00000489417 USP24Q9UPU5 2620 aa18.12■□□□□ 0.49
SND1-214ENST00000489417 TPRP12270 2363 aaKnown RBP18.11■□□□□ 0.49
SND1-214ENST00000489417 SPTA1P02549 2419 aa18.11■□□□□ 0.49
SND1-214ENST00000489417 FAM27E3Q08E93 113 aa18.11■□□□□ 0.49
SND1-214ENST00000489417 COLCA1Q6ZS62 124 aa18.11■□□□□ 0.49
SND1-214ENST00000489417 SLC25A46Q96AG3 418 aa18.11■□□□□ 0.49
SND1-214ENST00000489417 SGK3Q96BR1 496 aa18.11■□□□□ 0.49
SND1-214ENST00000489417 SOX7Q9BT81 388 aa18.11■□□□□ 0.49
SND1-214ENST00000489417 SLIRPQ9GZT3 109 aaKnown RBP18.11■□□□□ 0.49
SND1-214ENST00000489417 SLITRK2Q9H156 845 aa18.11■□□□□ 0.49
SND1-214ENST00000489417 ZNF275Q9NSD4 429 aaPredicted RBP18.11■□□□□ 0.49
SND1-214ENST00000489417 PMF1-BGLAPU3KQ54 211 aa18.11■□□□□ 0.49
SND1-214ENST00000489417 NBEAQ8NFP9 2946 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 SMIM30A4D0T7 59 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 LMX1BO60663 402 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 IGKV3-15P01624 115 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 CELA3BP08861 270 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 ZNF12P17014 697 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 SRMP19623 302 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 RORCP51449 518 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 HNRNPA0Q13151 305 aaKnown RBP18.1■□□□□ 0.49
SND1-214ENST00000489417 FJX1Q86VR8 437 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 PLPP7Q8NBV4 271 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 GALNT11Q8NCW6 608 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 CCDC54Q8NEL0 328 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 OR1J2Q8NGS2 313 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 DACH2Q96NX9 599 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 C1QTNF6Q9BXI9 259 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 BARHL1Q9BZE3 327 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 ACTR6Q9GZN1 396 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 MOV10Q9HCE1 1003 aaKnown RBP18.1■□□□□ 0.49
SND1-214ENST00000489417 TCF7L1Q9HCS4 588 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 ZNF391Q9UJN7 358 aa18.1■□□□□ 0.49
SND1-214ENST00000489417 XRCC2O43543 280 aa18.09■□□□□ 0.49
SND1-214ENST00000489417 CHRNB4P30926 498 aa18.09■□□□□ 0.49
SND1-214ENST00000489417 SLC25A35Q3KQZ1 300 aa18.09■□□□□ 0.49
SND1-214ENST00000489417 GLYATL3Q5SZD4 288 aa18.09■□□□□ 0.49
SND1-214ENST00000489417 C1QTNF12Q5T7M4 302 aa18.09■□□□□ 0.49
SND1-214ENST00000489417 Q6ZSR3 168 aa18.09■□□□□ 0.49
SND1-214ENST00000489417 MYPOPQ86VE0 399 aaPredicted RBP18.09■□□□□ 0.49
SND1-214ENST00000489417 PAQR4Q8N4S7 273 aaPredicted RBP18.09■□□□□ 0.49
SND1-214ENST00000489417 FAM169BQ8N8A8 192 aa18.09■□□□□ 0.49
SND1-214ENST00000489417 APOBEC3DQ96AK3 386 aaPredicted RBP18.09■□□□□ 0.49
SND1-214ENST00000489417 FGGYQ96C11 551 aa18.09■□□□□ 0.49
SND1-214ENST00000489417 REEP6Q96HR9 211 aa18.09■□□□□ 0.49
SND1-214ENST00000489417 TSC22D3Q99576 134 aa18.09■□□□□ 0.49
SND1-214ENST00000489417 RGCCQ9H4X1 137 aa18.09■□□□□ 0.49
SND1-214ENST00000489417 CDH20Q9HBT6 801 aa18.09■□□□□ 0.49
SND1-214ENST00000489417 COQ3Q9NZJ6 369 aa18.09■□□□□ 0.49
SND1-214ENST00000489417 CRNNQ9UBG3 495 aaPredicted RBP18.09■□□□□ 0.49
SND1-214ENST00000489417 TRAV8-7A0A075B6U6 113 aa18.08■□□□□ 0.49
SND1-214ENST00000489417 A0A1B0GUH1 482 aa18.08■□□□□ 0.49
SND1-214ENST00000489417 ANKRD61A6NGH8 418 aa18.08■□□□□ 0.49
SND1-214ENST00000489417 C16orf97H3BN30 126 aa18.08■□□□□ 0.49
SND1-214ENST00000489417 PDCD5O14737 125 aa18.08■□□□□ 0.49
SND1-214ENST00000489417 NCR1O76036 304 aa18.08■□□□□ 0.49
SND1-214ENST00000489417 FSTP19883 344 aa18.08■□□□□ 0.49
SND1-214ENST00000489417 RAB3BP20337 219 aa18.08■□□□□ 0.49
SND1-214ENST00000489417 PAX7P23759 505 aa18.08■□□□□ 0.49
SND1-214ENST00000489417 CCKARP32238 428 aa18.08■□□□□ 0.49
SND1-214ENST00000489417 CAV3P56539 151 aa18.08■□□□□ 0.49
SND1-214ENST00000489417 ADORA2A-AS1P86434 159 aa18.08■□□□□ 0.49
SND1-214ENST00000489417 OR14K1Q8NGZ2 314 aa18.08■□□□□ 0.49
SND1-214ENST00000489417 OR2AE1Q8NHA4 323 aa18.08■□□□□ 0.49
SND1-214ENST00000489417 MCFD2Q8NI22 146 aa18.08■□□□□ 0.49
SND1-214ENST00000489417 AKAP1Q92667 903 aaKnown RBP eCLIP18.08■□□□□ 0.491e-6■■■□□ 16.4
SND1-214ENST00000489417 MUCL1Q96DR8 90 aa18.08■□□□□ 0.49
SND1-214ENST00000489417 USB1Q9BQ65 265 aaKnown RBP18.08■□□□□ 0.49
SND1-214ENST00000489417 V9GYS6 101 aa18.08■□□□□ 0.49
SND1-214ENST00000489417 MTRF1O75570 445 aaKnown RBP18.07■□□□□ 0.48
SND1-214ENST00000489417 DHRS3O75911 302 aa18.07■□□□□ 0.48
SND1-214ENST00000489417 CLPXO76031 633 aa18.07■□□□□ 0.48
SND1-214ENST00000489417 IGLV1-44P01699 117 aa18.07■□□□□ 0.48
SND1-214ENST00000489417 ZNF20P17024 532 aa18.07■□□□□ 0.48
SND1-214ENST00000489417 WNT5AP41221 380 aa18.07■□□□□ 0.48
SND1-214ENST00000489417 ASCL1P50553 236 aa18.07■□□□□ 0.48
SND1-214ENST00000489417 TLE1Q04724 770 aa18.07■□□□□ 0.48
SND1-214ENST00000489417 ZNF404Q494X3 552 aa18.07■□□□□ 0.48
SND1-214ENST00000489417 LRRTM1Q86UE6 522 aa18.07■□□□□ 0.48
SND1-214ENST00000489417 NR2C2APQ86WQ0 139 aa18.07■□□□□ 0.48
SND1-214ENST00000489417 PARP16Q8N5Y8 322 aa18.07■□□□□ 0.48
SND1-214ENST00000489417 ADAT3Q96EY9 351 aaPredicted RBP18.07■□□□□ 0.48
SND1-214ENST00000489417 NXF2Q9GZY0 626 aaKnown RBP18.07■□□□□ 0.48
SND1-214ENST00000489417 OR10A4Q9H209 315 aa18.07■□□□□ 0.48
SND1-214ENST00000489417 TAS2R4Q9NYW5 299 aa18.07■□□□□ 0.48
SND1-214ENST00000489417 CKLFQ9UBR5 152 aa18.07■□□□□ 0.48
SND1-214ENST00000489417 FOXJ3Q9UPW0 622 aa18.07■□□□□ 0.48
SND1-214ENST00000489417 A3GALT2U3KPV4 340 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms