RNA–Protein interactions for RNA: ENST00000488998.1

CCDC146-209, Transcript of coiled-coil domain containing 146, humanhuman

TSL 3

Gene CCDC146, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146-209ENST00000488998 GYPBP06028 91 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 MRPL3P09001 348 aaKnown RBP2.92□□□□□ -1.94
CCDC146-209ENST00000488998 CSF3P09919 207 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 UCHL1P09936 223 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 CFC1BP0CG36 223 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 CFC1P0CG37 223 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 TRAPPC2P0DI81 140 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 TRAPPC2BP0DI82 140 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 GP1BBP13224 206 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 TDGF1P13385 188 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 HPGDP15428 266 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 ZNF19P17023 458 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 SPI1P17947 270 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 PGCP20142 388 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 NPR2P20594 1047 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 PYCR1P32322 319 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 RPL4P36578 427 aaKnown RBP2.92□□□□□ -1.94
CCDC146-209ENST00000488998 AQP2P41181 271 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 CASP3P42574 277 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 RPS5P46782 204 aaKnown RBP2.92□□□□□ -1.94
CCDC146-209ENST00000488998 ARRB1P49407 418 aaPredicted RBP2.92□□□□□ -1.94
CCDC146-209ENST00000488998 P2RX1P51575 399 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 NR0B1P51843 470 aaKnown RBP2.92□□□□□ -1.94
CCDC146-209ENST00000488998 CRIP2P52943 208 aaPredicted RBP2.92□□□□□ -1.94
CCDC146-209ENST00000488998 CAV3P56539 151 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 RPS11P62280 158 aaKnown RBP eCLIP2.92□□□□□ -1.94
CCDC146-209ENST00000488998 SIRPAP78324 504 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 ACY1Q03154 408 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 ZNF117Q03924 483 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 SLC3A1Q07837 685 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 CD300CQ08708 224 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 MRPL28Q13084 256 aaKnown RBP2.92□□□□□ -1.94
CCDC146-209ENST00000488998 RBM39Q14498 530 aaKnown RBP2.92□□□□□ -1.94
CCDC146-209ENST00000488998 CDK5R1Q15078 307 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 NSDHLQ15738 373 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 CLPPQ16740 277 aaPredicted RBP2.92□□□□□ -1.94
CCDC146-209ENST00000488998 MRGPRG-AS1Q2M3A8 158 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 NKAIN1Q4KMZ8 207 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 CCDC58Q4VC31 144 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 TP53I3Q53FA7 332 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 ACSM3Q53FZ2 586 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 VWA2Q5GFL6 755 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 CXorf66Q5JRM2 361 aaPredicted RBP2.92□□□□□ -1.94
CCDC146-209ENST00000488998 EEF1A1P5Q5VTE0 462 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 C1orf189Q5VU69 101 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 AGAP6Q5VW22 663 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 LYSMD4Q5XG99 296 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 OR7E24Q6IFN5 339 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 FAM131AQ6UXB0 335 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 SLC16A9Q7RTY1 509 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 CEACAM19Q7Z692 300 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 NRARPQ7Z6K4 114 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 MARCH3Q86UD3 253 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 SLC35F2Q8IXU6 374 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 TIGD4Q8IY51 512 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 PRR22Q8IZ63 422 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 Q8N9G6 341 aaPredicted RBP2.92□□□□□ -1.94
CCDC146-209ENST00000488998 GATSQ8NAP1 163 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 DUSP18Q8NEJ0 188 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 SDR9C7Q8NEX9 313 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 SLC24A4Q8NFF2 622 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 OR4D9Q8NGE8 314 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 OR8K3Q8NH51 312 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 ZPLD1Q8TCW7 415 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 HAVCR2Q8TDQ0 301 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 GPR119Q8TDV5 335 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 SAP25Q8TEE9 199 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 SMAP2Q8WU79 429 aaPredicted RBP2.92□□□□□ -1.94
CCDC146-209ENST00000488998 GHSRQ92847 366 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 TAAR8Q969N4 342 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 RASD2Q96D21 266 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 SMIM19Q96E16 107 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 ZMYND19Q96E35 227 aaPredicted RBP2.92□□□□□ -1.94
CCDC146-209ENST00000488998 OMA1Q96E52 524 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 Q96M85 177 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 AGAP4Q96P64 663 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 NEDD4LQ96PU5 975 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 NMNAT3Q96T66 252 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 TBX5Q99593 518 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 CDX2Q99626 313 aaPredicted RBP2.92□□□□□ -1.94
CCDC146-209ENST00000488998 LPAR4Q99677 370 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 NDEL1Q9GZM8 345 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 SLC22A4Q9H015 551 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 PPIL3Q9H2H8 161 aaKnown RBP2.92□□□□□ -1.94
CCDC146-209ENST00000488998 RERGLQ9H628 205 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 TIGARQ9NQ88 270 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 NANSQ9NR45 359 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 COMMD3Q9UBI1 195 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 COPS7AQ9UBW8 275 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 CTSFQ9UBX1 484 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 COPS3Q9UNS2 423 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 MED12Q93074 2177 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 WDR87Q6ZQQ6 2873 aa2.92□□□□□ -1.94
CCDC146-209ENST00000488998 AHCTF1Q8WYP5 2266 aa2.91□□□□□ -1.94
CCDC146-209ENST00000488998 DOCK10Q96BY6 2186 aa2.91□□□□□ -1.94
CCDC146-209ENST00000488998 IGLV3-32A0A0A0MS00 114 aa2.91□□□□□ -1.94
CCDC146-209ENST00000488998 TMED7-TICAM2A0A0A6YYA0 188 aa2.91□□□□□ -1.94
CCDC146-209ENST00000488998 TRBV5-5A0A0J9YX44 114 aa2.91□□□□□ -1.94
CCDC146-209ENST00000488998 IGHV5-10-1A0A0J9YXX1 117 aa2.91□□□□□ -1.94
CCDC146-209ENST00000488998 SMIM30A4D0T7 59 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms