RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 TOMM40O96008 361 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 CST1P01037 141 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 SELLP14151 372 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 PSMB1P20618 241 aaKnown RBP5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 GTF2E2P29084 291 aaKnown RBP5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 CCKARP32238 428 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 GPR4P46093 362 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 PCYT1AP49585 367 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 IST1P53990 364 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 BIDP55957 195 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 SMIM11AP58511 58 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 IL1RL1Q01638 556 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 POU3F1Q03052 451 aaPredicted RBP5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 CAMK2DQ13557 499 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 C1DQ13901 141 aaKnown RBP5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 PNLIPRP3Q17RR3 467 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 ZBED5Q49AG3 693 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 C9orf135Q5VTT2 229 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 CARD17Q5XLA6 110 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 OR2T5Q6IEZ7 315 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 ZNF770Q6IQ21 691 aaPredicted RBP5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 C1orf94Q6P1W5 598 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 NIPAL3Q6P499 406 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 CASP12Q6UXS9 341 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 Q6ZT83 130 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 SLC35D2Q76EJ3 337 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 OAFQ86UD1 273 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 CDK20Q8IZL9 346 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 TMEM123Q8N131 208 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 UBE2J2Q8N2K1 259 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 ZNF433Q8N7K0 673 aaPredicted RBP5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 PRR26Q8N8Z3 221 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 OR13C2Q8NGS9 318 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 OR2T29Q8NH02 315 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 APH1AQ96BI3 265 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 MUS81Q96NY9 551 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 OR2M2Q96R28 347 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 TEX12Q9BXU0 123 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 TRIM15Q9C019 465 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 HRH4Q9H3N8 390 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 NTN4Q9HB63 628 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 MCCC2Q9HCC0 563 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 MRPL15Q9P015 296 aaKnown RBP5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 OR14J1Q9UGF5 321 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 IL20RAQ9UHF4 553 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 ZNF346Q9UL40 294 aaKnown RBP5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 SIGLEC7Q9Y286 467 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 MAGED1Q9Y5V3 778 aaPredicted RBP5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 U3KQV3 271 aa5.35□□□□□ -1.55
RTFDC1-209ENST00000487211 hDV102S1A0JD36 115 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 TUBAL3A6NHL2 446 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 RPL36A-HNRNPH2H7BZ11 118 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 CLOCKO15516 846 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 OR10H3O60404 316 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 NDUFS7O75251 213 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 FKBP6O75344 327 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 OR6A2O95222 327 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 STAMBPO95630 424 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 IGFBP1P08833 259 aaPredicted RBP5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 SAGP10523 405 aaPredicted RBP5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 COX6B1P14854 86 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 COX5AP20674 150 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 PRKACGP22612 351 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 GSSP48637 474 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 SLC9A3P48764 834 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 RPS4XP62701 263 aaKnown RBP5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 MELKQ14680 651 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 P2RY6Q15077 328 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 GABRA6Q16445 453 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 ACKR1Q16570 336 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 MICAQ29983 383 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 ARMC4Q5T2S8 1044 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 C1orf146Q5VVC0 180 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 BHLHA15Q7RTS1 189 aaPredicted RBP5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 NANOGNBQ7Z5D8 188 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 C1QL2Q7Z5L3 287 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 C20orf196Q8IYI0 205 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 HS3ST5Q8IZT8 346 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 WDR31Q8NA23 367 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 NEXN-AS1Q8NBZ9 246 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 OR9Q2Q8NGE9 314 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 OR6X1Q8NH79 312 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 GNPDA2Q8TDQ7 276 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 POP5Q969H6 163 aaKnown RBP5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 S100PBPQ96BU1 408 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 DUS3LQ96G46 650 aaKnown RBP5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 LRR1Q96L50 414 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 ZNF48Q96MX3 618 aaPredicted RBP5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 MRPL13Q9BYD1 178 aaKnown RBP5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 LINC00470Q9BZP3 86 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 SLCO5A1Q9H2Y9 848 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 INIPQ9NRY2 104 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 ARMC1Q9NVT9 282 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 MALT1Q9UDY8 824 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 TMCC3Q9ULS5 477 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 AP4S1Q9Y587 144 aa5.34□□□□□ -1.55
RTFDC1-209ENST00000487211 MGAM2Q2M2H8 2515 aa5.34□□□□□ -1.56
RTFDC1-209ENST00000487211 MAP1AP78559 2803 aaPredicted RBP5.33□□□□□ -1.56
RTFDC1-209ENST00000487211 IGKV1D-43A0A0B4J1Z2 117 aa5.33□□□□□ -1.56
RTFDC1-209ENST00000487211 A0A1W2PR80 420 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms