RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 SSX2Q16385 188 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 UBE2UQ5VVX9 321 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 NBPF5PQ86XG9 351 aaPredicted RBP1.04□□□□□ -2.24
SCAF11-207ENST00000484275 LINC00469Q8N7U9 141 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 NECAB1Q8N987 351 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 LY6G5BQ8NDX9 201 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 OR2Z1Q8NG97 314 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 OR13C2Q8NGS9 318 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 MUC7Q8TAX7 377 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 EEF1AKMT3Q96AZ1 226 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 TUBGCP3Q96CW5 907 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 RNF145Q96MT1 663 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 ZNF649Q9BS31 505 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 TRIM45Q9H8W5 580 aaPredicted RBP1.04□□□□□ -2.24
SCAF11-207ENST00000484275 YARS2Q9Y2Z4 477 aaKnown RBP1.04□□□□□ -2.24
SCAF11-207ENST00000484275 PCDH11XQ9BZA7 1347 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 BRCA1P38398 1863 aaKnown RBP1.03□□□□□ -2.24
SCAF11-207ENST00000484275 ARHGEF35A5YM69 484 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 TNFRSF11BO00300 401 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 NMT2O60551 498 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 SLC2A3P11169 496 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 NDUFA8P51970 172 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 CDH6P55285 790 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 TAS2R46P59540 309 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 BST2Q10589 180 aaKnown RBP1.03□□□□□ -2.24
SCAF11-207ENST00000484275 SP6Q3SY56 376 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 FAM131AQ6UXB0 335 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 C12orf54Q6X4T0 127 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 NANOGNBQ7Z5D8 188 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 MRPL55Q7Z7F7 128 aaKnown RBP1.03□□□□□ -2.24
SCAF11-207ENST00000484275 UBE2J2Q8N2K1 259 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 GTPBP8Q8N3Z3 284 aaPredicted RBP1.03□□□□□ -2.24
SCAF11-207ENST00000484275 OR9K2Q8NGE7 335 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 GPR151Q8TDV0 419 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 KIFAP3Q92845 792 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 NT5C3BQ969T7 300 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 OR51M1Q9H341 326 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 ASF1BQ9NVP2 202 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 NLE1Q9NVX2 485 aaPredicted RBP1.03□□□□□ -2.24
SCAF11-207ENST00000484275 TAS2R5Q9NYW4 299 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 AKNAQ7Z591 1439 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 SIGLEC1Q9BZZ2 1709 aa1.03□□□□□ -2.24
SCAF11-207ENST00000484275 DYSFO75923 2080 aa1.03□□□□□ -2.25
SCAF11-207ENST00000484275 PALMO75781 387 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 SCELO95171 688 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 CST1P01037 141 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 ARG1P05089 322 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 ANXA5P08758 320 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 CTRB1P17538 263 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 NCF2P19878 526 aaPredicted RBP1.02□□□□□ -2.25
SCAF11-207ENST00000484275 CD70P32970 193 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 TALDO1P37837 337 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 ACTR3P61158 418 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 BST1Q10588 318 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 MYO9BQ13459 2157 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 DDX39BQ13838 428 aaKnown RBP1.02□□□□□ -2.25
SCAF11-207ENST00000484275 KRTAP21-3Q3LHN1 58 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 PRAMEF5Q5TYX0 476 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 PRAMEF6Q5VXH4 476 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 ZBED9Q6R2W3 1325 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 NPSR1Q6W5P4 371 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 TAS2R42Q7RTR8 314 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 OR10G6Q8NH81 332 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 SLC2A14Q8TDB8 520 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 APH1BQ8WW43 257 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 FBXO32Q969P5 355 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 TPD52L3Q96J77 140 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 USP47Q96K76 1375 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 KCNS1Q96KK3 526 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 IGF2BP2-AS1Q96M15 143 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 ANKRD60Q9BZ19 345 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 GCOM2Q9BZD3 368 aaPredicted RBP1.02□□□□□ -2.25
SCAF11-207ENST00000484275 DSN1Q9H410 356 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 MED4Q9NPJ6 270 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 SLC2A8Q9NY64 477 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 IL37Q9NZH6 218 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 PDP1Q9P0J1 537 aaPredicted RBP1.02□□□□□ -2.25
SCAF11-207ENST00000484275 HPCAL4Q9UM19 191 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 CSDC2Q9Y534 153 aaKnown RBP1.02□□□□□ -2.25
SCAF11-207ENST00000484275 ASB3Q9Y575 518 aa1.02□□□□□ -2.25
SCAF11-207ENST00000484275 MPHOSPH10O00566 681 aaKnown RBP1.01□□□□□ -2.25
SCAF11-207ENST00000484275 ARL14EPLP0DKL9 152 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 PRKACBP22694 351 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 FOXN2P32314 431 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 TAS2R43P59537 309 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 HMGN5P82970 282 aaKnown RBP1.01□□□□□ -2.25
SCAF11-207ENST00000484275 SP4Q02446 784 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 PPP1R7Q15435 360 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 VPS26BQ4G0F5 336 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 PCOTHQ58A44 107 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 PPM1LQ5SGD2 360 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 C1orf185Q5T7R7 199 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 AMMECR1LQ6DCA0 310 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 CERS6Q6ZMG9 384 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 CDR2LQ86X02 465 aaPredicted RBP1.01□□□□□ -2.25
SCAF11-207ENST00000484275 ERO1BQ86YB8 467 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 FAM71AQ8IYT1 594 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 SPATA4Q8NEY3 305 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 OR56B2PQ8NGI1 322 aa1.01□□□□□ -2.25
SCAF11-207ENST00000484275 NUBPLQ8TB37 319 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms