RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 DCTDP32321 178 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 PTGER4P35408 488 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 KIR2DL2P43627 348 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-216ENST00000484087 RPS11P62280 158 aaKnown RBP eCLIP6.08□□□□□ -1.44
BRCA1-216ENST00000484087 SCN1BQ07699 218 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 FAM27E3Q08E93 113 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 IL18Q14116 193 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 OXA1LQ15070 435 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 TSC22D1Q15714 1073 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 PCK2Q16822 640 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 SLC25A35Q3KQZ1 300 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 FAM27D1Q5T7N8 215 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 TMEM244Q5VVB8 128 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 TRIQKQ629K1 86 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 SLC25A47Q6Q0C1 308 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 ZNF474Q6S9Z5 364 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-216ENST00000484087 ZNF704Q6ZNC4 412 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-216ENST00000484087 SPATC1Q76KD6 591 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 CHMP1BQ7LBR1 199 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 LYSMD2Q8IV50 215 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 C19orf18Q8NEA5 215 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 MCHR2Q969V1 340 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 STARD4Q96DR4 205 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 SLAMF6Q96DU3 332 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 CMTM3Q96MX0 182 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 DERL3Q96Q80 235 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 RBM24Q9BX46 236 aaKnown RBP6.08□□□□□ -1.44
BRCA1-216ENST00000484087 MIXL1Q9H2W2 232 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 NIPAL2Q9H841 368 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 MOB1AQ9H8S9 216 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 SP140LQ9H930 580 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 CALHM2Q9HA72 323 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 PAQR5Q9NXK6 330 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-216ENST00000484087 GLTPQ9NZD2 209 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 RABL2AQ9UBK7 228 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-216ENST00000484087 CKLFQ9UBR5 152 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 ING1Q9UK53 422 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-216ENST00000484087 RABL2BQ9UNT1 228 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 LRP12Q9Y561 859 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 R4GMQ9 66 aa6.08□□□□□ -1.44
BRCA1-216ENST00000484087 CCDC168Q8NDH2 2452 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 TRBV5-5A0A0J9YX44 114 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 TMEM269A0A1B0GVZ9 245 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 A0A1W2PPR1 153 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 ACOD1A6NK06 481 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 ZNF814B7Z6K7 855 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 ZNF878C9JN71 531 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 SMAD9O15198 467 aaKnown RBP6.07□□□□□ -1.44
BRCA1-216ENST00000484087 RAMP1O60894 148 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 SLC43A1O75387 559 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 SYNGR4O95473 234 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 UBCP0CG48 685 aaKnown RBP6.07□□□□□ -1.44
BRCA1-216ENST00000484087 EPXP11678 715 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 RANBP1P43487 201 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 SOX2P48431 317 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 EVX1P49640 407 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 LSM6P62312 80 aaKnown RBP6.07□□□□□ -1.44
BRCA1-216ENST00000484087 PITPNAQ00169 270 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 KCNMB1Q16558 191 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 HIST3H3Q16695 136 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 WDR38Q5JTN6 314 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 C10orf128Q5T292 105 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 BCL2L15Q5TBC7 163 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 STEAP3Q658P3 488 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 CNIH2Q6PI25 160 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 LRFN4Q6PJG9 635 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 BAIAP2L2Q6UXY1 529 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 NHLRC1Q6VVB1 395 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 RHOUQ7L0Q8 258 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 NUFIP2Q7Z417 695 aaKnown RBP6.07□□□□□ -1.44
BRCA1-216ENST00000484087 LINC00346Q8IVM7 164 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 ZNF433Q8N7K0 673 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-216ENST00000484087 SAMD12Q8N8I0 201 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 ZNF610Q8N9Z0 462 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 TRMT10AQ8TBZ6 339 aaKnown RBP6.07□□□□□ -1.44
BRCA1-216ENST00000484087 ST7LQ8TDW4 575 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 RNF133Q8WVZ7 376 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 HSD17B8Q92506 261 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 RNASE6Q93091 150 aaKnown RBP6.07□□□□□ -1.44
BRCA1-216ENST00000484087 TMEM106AQ96A25 262 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 PPP1R14BQ96C90 147 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 ZC3HAV1LQ96H79 300 aaKnown RBP6.07□□□□□ -1.44
BRCA1-216ENST00000484087 MAP6Q96JE9 813 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 OR2M2Q96R28 347 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 AMELYQ99218 206 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 SPOCK3Q9BQ16 436 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 PRRG4Q9BZD6 226 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 ULBP2Q9BZM5 246 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 SRRQ9GZT4 340 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 PPIL3Q9H2H8 161 aaKnown RBP6.07□□□□□ -1.44
BRCA1-216ENST00000484087 NELFAQ9H3P2 528 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 RNF122Q9H9V4 155 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 BRD7Q9NPI1 651 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 FAIMQ9NVQ4 179 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 JKAMPQ9P055 326 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 EXTL2Q9UBQ6 330 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 ZNF629Q9UEG4 869 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-216ENST00000484087 CYB5R1Q9UHQ9 305 aa6.07□□□□□ -1.44
BRCA1-216ENST00000484087 GDF2Q9UK05 429 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-216ENST00000484087 OR52A1Q9UKL2 312 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms