RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 N6AMT1Q9Y5N5 214 aa22.98■■□□□ 1.27
SHOX2-204ENST00000483851 AHRRA9YTQ3 701 aa22.97■■□□□ 1.27
SHOX2-204ENST00000483851 H3BSH0 61 aa22.97■■□□□ 1.27
SHOX2-204ENST00000483851 UBL3O95164 117 aa22.97■■□□□ 1.27
SHOX2-204ENST00000483851 CRYABP02511 175 aaKnown RBP22.97■■□□□ 1.27
SHOX2-204ENST00000483851 NKX2-5P52952 324 aaPredicted RBP22.97■■□□□ 1.27
SHOX2-204ENST00000483851 ARF1P84077 181 aaKnown RBP22.97■■□□□ 1.27
SHOX2-204ENST00000483851 GPR176Q14439 515 aa22.97■■□□□ 1.27
SHOX2-204ENST00000483851 TBRG1Q3YBR2 411 aa22.97■■□□□ 1.27
SHOX2-204ENST00000483851 SLC36A2Q495M3 483 aa22.97■■□□□ 1.27
SHOX2-204ENST00000483851 LGALS14Q8TCE9 139 aa22.97■■□□□ 1.27
SHOX2-204ENST00000483851 UPRTQ96BW1 309 aa22.97■■□□□ 1.27
SHOX2-204ENST00000483851 PGAM5Q96HS1 289 aa22.97■■□□□ 1.27
SHOX2-204ENST00000483851 FAM210AQ96ND0 272 aa22.97■■□□□ 1.27
SHOX2-204ENST00000483851 TAS2R4Q9NYW5 299 aa22.97■■□□□ 1.27
SHOX2-204ENST00000483851 F5H5K5 113 aa22.96■■□□□ 1.27
SHOX2-204ENST00000483851 IGHV3-9P01782 118 aa22.96■■□□□ 1.27
SHOX2-204ENST00000483851 MMP7P09237 267 aaPredicted RBP22.96■■□□□ 1.27
SHOX2-204ENST00000483851 SLC6A1P30531 599 aa22.96■■□□□ 1.27
SHOX2-204ENST00000483851 OR3A2P47893 321 aa22.96■■□□□ 1.27
SHOX2-204ENST00000483851 INPP1P49441 399 aa22.96■■□□□ 1.27
SHOX2-204ENST00000483851 SF3B4Q15427 424 aaKnown RBP eCLIP22.96■■□□□ 1.27
SHOX2-204ENST00000483851 ZNF57Q68EA5 555 aaPredicted RBP22.96■■□□□ 1.27
SHOX2-204ENST00000483851 Q6ZSR3 168 aa22.96■■□□□ 1.27
SHOX2-204ENST00000483851 DPPA2Q7Z7J5 298 aa22.96■■□□□ 1.27
SHOX2-204ENST00000483851 PLPP7Q8NBV4 271 aa22.96■■□□□ 1.27
SHOX2-204ENST00000483851 OR5D14Q8NGL3 314 aa22.96■■□□□ 1.27
SHOX2-204ENST00000483851 FOXRED1Q96CU9 486 aaPredicted RBP22.96■■□□□ 1.27
SHOX2-204ENST00000483851 ZNF486Q96H40 463 aaPredicted RBP22.96■■□□□ 1.27
SHOX2-204ENST00000483851 AKAP13Q12802 2813 aa22.96■■□□□ 1.27
SHOX2-204ENST00000483851 SLC17A2O00624 439 aa22.96■■□□□ 1.27
SHOX2-204ENST00000483851 PDGFAP04085 211 aa22.96■■□□□ 1.27
SHOX2-204ENST00000483851 MMP15P51511 669 aa22.96■■□□□ 1.27
SHOX2-204ENST00000483851 PSG4Q00888 419 aa22.96■■□□□ 1.27
SHOX2-204ENST00000483851 PLA1AQ53H76 456 aa22.96■■□□□ 1.27
SHOX2-204ENST00000483851 NCCRP1Q6ZVX7 275 aaPredicted RBP22.96■■□□□ 1.27
SHOX2-204ENST00000483851 GPR84Q9NQS5 396 aa22.96■■□□□ 1.27
SHOX2-204ENST00000483851 SLC2A1P11166 492 aa22.95■■□□□ 1.26
SHOX2-204ENST00000483851 TATDN3Q17R31 274 aa22.95■■□□□ 1.26
SHOX2-204ENST00000483851 FBXW9Q5XUX1 488 aa22.95■■□□□ 1.26
SHOX2-204ENST00000483851 RAB40AQ8WXH6 277 aa22.95■■□□□ 1.26
SHOX2-204ENST00000483851 WNT2BQ93097 391 aa22.95■■□□□ 1.26
SHOX2-204ENST00000483851 YIPF5Q969M3 257 aa22.95■■□□□ 1.26
SHOX2-204ENST00000483851 FGGYQ96C11 551 aa22.95■■□□□ 1.26
SHOX2-204ENST00000483851 ABCG5Q9H222 651 aa22.95■■□□□ 1.26
SHOX2-204ENST00000483851 ZNF319Q9P2F9 582 aa22.95■■□□□ 1.26
SHOX2-204ENST00000483851 EEF1E1O43324 174 aaKnown RBP22.94■■□□□ 1.26
SHOX2-204ENST00000483851 SLC6A9P48067 706 aa22.94■■□□□ 1.26
SHOX2-204ENST00000483851 CAPZA1P52907 286 aa22.94■■□□□ 1.26
SHOX2-204ENST00000483851 FAM166AQ6J272 317 aa22.94■■□□□ 1.26
SHOX2-204ENST00000483851 ZNF774Q6NX45 483 aa22.94■■□□□ 1.26
SHOX2-204ENST00000483851 ZNF529Q6P280 563 aa22.94■■□□□ 1.26
SHOX2-204ENST00000483851 PGAP1Q75T13 922 aa22.94■■□□□ 1.26
SHOX2-204ENST00000483851 DNAAF1Q8NEP3 725 aa22.94■■□□□ 1.26
SHOX2-204ENST00000483851 OR1J2Q8NGS2 313 aa22.94■■□□□ 1.26
SHOX2-204ENST00000483851 WNT5BQ9H1J7 359 aa22.94■■□□□ 1.26
SHOX2-204ENST00000483851 CTDSPLO15194 276 aa22.94■■□□□ 1.26
SHOX2-204ENST00000483851 TPPPO94811 219 aa22.94■■□□□ 1.26
SHOX2-204ENST00000483851 BTCP35070 178 aa22.94■■□□□ 1.26
SHOX2-204ENST00000483851 PITPNAQ00169 270 aa22.94■■□□□ 1.26
SHOX2-204ENST00000483851 CREB3L1Q96BA8 519 aa22.94■■□□□ 1.26
SHOX2-204ENST00000483851 C10orf35Q96D05 121 aa22.94■■□□□ 1.26
SHOX2-204ENST00000483851 OR5V1Q9UGF6 321 aa22.94■■□□□ 1.26
SHOX2-204ENST00000483851 ZNF391Q9UJN7 358 aa22.94■■□□□ 1.26
SHOX2-204ENST00000483851 ALG5Q9Y673 324 aa22.94■■□□□ 1.26
SHOX2-204ENST00000483851 LOC390937A0A1W2PQ73 354 aa22.93■■□□□ 1.26
SHOX2-204ENST00000483851 GSTZ1O43708 216 aaPredicted RBP22.93■■□□□ 1.26
SHOX2-204ENST00000483851 COX5BP10606 129 aa22.93■■□□□ 1.26
SHOX2-204ENST00000483851 MPGP29372 298 aa22.93■■□□□ 1.26
SHOX2-204ENST00000483851 UCNP55089 124 aa22.93■■□□□ 1.26
SHOX2-204ENST00000483851 FAPQ12884 760 aa22.93■■□□□ 1.26
SHOX2-204ENST00000483851 OR2A2Q6IF42 318 aa22.93■■□□□ 1.26
SHOX2-204ENST00000483851 COMMD2Q86X83 199 aa22.93■■□□□ 1.26
SHOX2-204ENST00000483851 TRIB1Q96RU8 372 aa22.93■■□□□ 1.26
SHOX2-204ENST00000483851 OR10A2Q9H208 303 aa22.93■■□□□ 1.26
SHOX2-204ENST00000483851 CNOT4O95628 575 aaKnown RBP22.92■■□□□ 1.26
SHOX2-204ENST00000483851 ERCC1P07992 297 aaPredicted RBP22.92■■□□□ 1.26
SHOX2-204ENST00000483851 ZNF20P17024 532 aa22.92■■□□□ 1.26
SHOX2-204ENST00000483851 HTR5AP47898 357 aa22.92■■□□□ 1.26
SHOX2-204ENST00000483851 GUSBP1Q15486 140 aa22.92■■□□□ 1.26
SHOX2-204ENST00000483851 RAB11BQ15907 218 aa22.92■■□□□ 1.26
SHOX2-204ENST00000483851 CDH26Q8IXH8 852 aa22.92■■□□□ 1.26
SHOX2-204ENST00000483851 OR6M1Q8NGM8 313 aa22.92■■□□□ 1.26
SHOX2-204ENST00000483851 TMEM138Q9NPI0 162 aa22.92■■□□□ 1.26
SHOX2-204ENST00000483851 LHX6Q9UPM6 363 aa22.92■■□□□ 1.26
SHOX2-204ENST00000483851 ARHGAP21Q5T5U3 1957 aa22.92■■□□□ 1.26
SHOX2-204ENST00000483851 MTRF1O75570 445 aaKnown RBP22.92■■□□□ 1.26
SHOX2-204ENST00000483851 BDKRB2P30411 391 aa22.92■■□□□ 1.26
SHOX2-204ENST00000483851 BTG1P62324 171 aa22.92■■□□□ 1.26
SHOX2-204ENST00000483851 IFITM2Q01629 132 aa22.92■■□□□ 1.26
SHOX2-204ENST00000483851 C1orf100Q5SVJ3 147 aa22.92■■□□□ 1.26
SHOX2-204ENST00000483851 FAM214BQ7L5A3 538 aa22.92■■□□□ 1.26
SHOX2-204ENST00000483851 OR1M1Q8NGA1 313 aa22.92■■□□□ 1.26
SHOX2-204ENST00000483851 ADAT3Q96EY9 351 aaPredicted RBP22.92■■□□□ 1.26
SHOX2-204ENST00000483851 CACNG2Q9Y698 323 aa22.92■■□□□ 1.26
SHOX2-204ENST00000483851 DHRS7CA6NNS2 312 aa22.91■■□□□ 1.26
SHOX2-204ENST00000483851 A8MV72 311 aaPredicted RBP22.91■■□□□ 1.26
SHOX2-204ENST00000483851 ITGA5P08648 1049 aa22.91■■□□□ 1.26
SHOX2-204ENST00000483851 RAB3AP20336 220 aa22.91■■□□□ 1.26
SHOX2-204ENST00000483851 ARR3P36575 388 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms