RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 LYPD4Q6UWN0 246 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 SLC36A1Q7Z2H8 476 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 LINC01555Q8NAE3 123 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 REEP6Q96HR9 211 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 DOK1Q99704 481 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 PIGMQ9H3S5 423 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 DLL4Q9NR61 685 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 C19orf12Q9NSK7 152 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 RNF24Q9Y225 148 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 FAM96BQ9Y3D0 163 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 PHF1O43189 567 aaPredicted RBP8.55□□□□□ -1.04
GARNL3-216ENST00000481242 CNR1P21554 472 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 THBS4P35443 961 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 INSM1Q01101 510 aaPredicted RBP8.55□□□□□ -1.04
GARNL3-216ENST00000481242 CDK5R1Q15078 307 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 RAB35Q15286 201 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 TMEM200AQ86VY9 491 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 LAX1Q8IWV1 398 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 SLC38A6Q8IZM9 456 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 OR5AS1Q8N127 324 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 ZNF419Q96HQ0 510 aaPredicted RBP8.55□□□□□ -1.04
GARNL3-216ENST00000481242 RBM14Q96PK6 669 aaKnown RBP8.55□□□□□ -1.04
GARNL3-216ENST00000481242 DLEC1Q9Y238 1755 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 A0A0B4J2E0 115 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 A0A1B0GX12 115 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 B4E171 279 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 AIPO00170 330 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 CPEP16870 476 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 CALCRP30988 508 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 TSPAN7P41732 249 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 OPCMLQ14982 345 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 GSG1Q2KHT4 349 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 TMEM108Q6UXF1 575 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 CATSPERDQ86XM0 798 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 ZNF768Q9H5H4 540 aaKnown RBP8.55□□□□□ -1.04
GARNL3-216ENST00000481242 NARFLQ9H6Q4 476 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 WDR54Q9H977 334 aa8.55□□□□□ -1.04
GARNL3-216ENST00000481242 K7EQM0 130 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 PNPP00491 289 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 C21orf58P58505 322 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 SSBP1Q04837 148 aaKnown RBP8.54□□□□□ -1.04
GARNL3-216ENST00000481242 WIPI1Q5MNZ9 446 aaPredicted RBP8.54□□□□□ -1.04
GARNL3-216ENST00000481242 CD276Q5ZPR3 534 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 OGFOD3Q6PK18 319 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 Q7L0L9 218 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 H2BFWTQ7Z2G1 175 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 ZNF547Q8IVP9 402 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 PBOV1Q9GZY1 135 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 TNFRSF12AQ9NP84 129 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 MMP25Q9NPA2 562 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 ASF1BQ9NVP2 202 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 COLQQ9Y215 455 aaPredicted RBP8.54□□□□□ -1.04
GARNL3-216ENST00000481242 MEIKINA0A087WXM9 373 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 A6NIN4 97 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 EMDP50402 254 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 HTD2P86397 168 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 FUT7Q11130 342 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 ASAH1Q13510 395 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 FAM74A1Q5RGS3 127 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 OR10X1Q8NGY0 326 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 CA5BP1Q8WTZ4 195 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 FN3KRPQ9HA64 309 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 SLCO1C1Q9NYB5 712 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 TCFL5Q9UL49 500 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 TRIOBPQ9H2D6 2365 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 MARF1Q9Y4F3 1742 aaKnown RBP8.54□□□□□ -1.04
GARNL3-216ENST00000481242 A0A096LPE4 126 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 A0A1W2PPZ6 126 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 OR5H15A6NDH6 313 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 ACTL6AO96019 429 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 ALDH3B1P43353 468 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 ZIC1Q15915 447 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 IAH1Q2TAA2 248 aaPredicted RBP8.54□□□□□ -1.04
GARNL3-216ENST00000481242 OR52W1Q6IF63 320 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 VN1R4Q7Z5H5 301 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 CALHM3Q86XJ0 350 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 OR1F12Q8NHA8 337 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 SLC25A46Q96AG3 418 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 C1QTNF6Q9BXI9 259 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 NDUFB11Q9NX14 153 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 TUBGCP6Q96RT7 1819 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 A0A1W2PQD3 144 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 TCRBP04435 133 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 LIPCP11150 499 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 MYF5P13349 255 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 B4GALT1P15291 398 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 AADACP22760 399 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 CHATP28329 748 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 PTPN6P29350 595 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 FABP6P51161 128 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 GP2P55259 537 aaKnown RBP8.54□□□□□ -1.04
GARNL3-216ENST00000481242 RAB1AP62820 205 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 ZNF141Q15928 474 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 PRICKLE4Q2TBC4 344 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 KRBOX4Q5JUW0 171 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 PRAMEF5Q5TYX0 476 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 PRAMEF6Q5VXH4 476 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 PMS2CLQ68D20 193 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 ZNF793Q6ZN11 406 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 LINC00518Q8N0U6 118 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms