RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 ACOT9Q9Y305 439 aa0.27□□□□□ -2.37
HPS3-205ENST00000478525 CAB39Q9Y376 341 aaPredicted RBP0.27□□□□□ -2.37
HPS3-205ENST00000478525 USP47Q96K76 1375 aa0.27□□□□□ -2.37
HPS3-205ENST00000478525 NPHP4O75161 1426 aaPredicted RBP0.27□□□□□ -2.37
HPS3-205ENST00000478525 AKNAQ7Z591 1439 aa0.27□□□□□ -2.37
HPS3-205ENST00000478525 MIA3Q5JRA6 1907 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 C15orf38-AP3S2A0A0A6YYH1 394 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 ZNF816-ZNF321PA0A0X1KG74 233 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 SIGLEC16A6NMB1 481 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 GABRR3A8MPY1 467 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 LEUTXA8MZ59 168 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 PHGR1C9JFL3 82 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 C9JQL5 133 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 G3V3Q6 166 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 K7EQM0 130 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 HAS3O00219 553 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 PRRG1O14668 218 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 AIM2O14862 343 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 MYL12BO14950 172 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 PPP1R2P9O14990 202 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 GMFGO60234 142 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 KLHL41O60662 606 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 RAD1O60671 282 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 FKBP6O75344 327 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 FSTL3O95633 263 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 CPSF4O95639 269 aaKnown RBP0.26□□□□□ -2.37
HPS3-205ENST00000478525 PTBP3O95758 552 aaKnown RBP0.26□□□□□ -2.37
HPS3-205ENST00000478525 TMEM50AO95807 157 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 IGHV3-53P01767 116 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 SLC35G6P0C7Q6 338 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 TNNI1P19237 187 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 GZMHP20718 246 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 U2AF2P26368 475 aaKnown RBP eCLIP0.26□□□□□ -2.37
HPS3-205ENST00000478525 PSMA5P28066 241 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 RRM2P31350 389 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 HNRNPH3P31942 346 aaKnown RBP0.26□□□□□ -2.37
HPS3-205ENST00000478525 PRSS3P35030 304 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 APLNRP35414 380 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 MAGEA8P43361 318 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 RABIFP47224 123 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 TMED10P49755 219 aaKnown RBP0.26□□□□□ -2.37
HPS3-205ENST00000478525 CCNHP51946 323 aaPredicted RBP0.26□□□□□ -2.37
HPS3-205ENST00000478525 EMP2P54851 167 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 CCL23P55773 120 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 GFERP55789 205 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 OR12D2P58182 307 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 RPS15AP62244 130 aaKnown RBP0.26□□□□□ -2.37
HPS3-205ENST00000478525 RPL23AP62750 156 aaKnown RBP0.26□□□□□ -2.37
HPS3-205ENST00000478525 ACTG2P63267 376 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 PRR3P79522 188 aaKnown RBP0.26□□□□□ -2.37
HPS3-205ENST00000478525 HTD2P86397 168 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 IL5RAQ01344 420 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 TGM3Q08188 693 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 PRDX4Q13162 271 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 ELOCQ15369 112 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 SLC9A3R2Q15599 337 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 SLC25A35Q3KQZ1 300 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 VPS26BQ4G0F5 336 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 NADK2Q4G0N4 442 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 N4BP2L1Q5TBK1 243 aaPredicted RBP0.26□□□□□ -2.37
HPS3-205ENST00000478525 ZNF660Q6AZW8 331 aaPredicted RBP0.26□□□□□ -2.37
HPS3-205ENST00000478525 ANKRD26P1Q6NSI1 321 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 TTC23LQ6PF05 361 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 Q6ZQT7 251 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 ZNF767PQ75MW2 155 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 MRPL55Q7Z7F7 128 aaKnown RBP0.26□□□□□ -2.37
HPS3-205ENST00000478525 COMTD1Q86VU5 262 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 TMEM123Q8N131 208 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 ZNF619Q8N2I2 560 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 BPIFCQ8NFQ6 507 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 OR1S1Q8NH92 325 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 LRRC29Q8WV35 223 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 CACNG8Q8WXS5 425 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 RERGQ96A58 199 aaPredicted RBP0.26□□□□□ -2.37
HPS3-205ENST00000478525 HAUS1Q96CS2 278 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 CCDC126Q96EE4 140 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 PKNOX2Q96KN3 472 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 IGF2BP2-AS1Q96M15 143 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 C20orf166-AS1Q96NR2 134 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 TMEM237Q96Q45 408 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 PANX2Q96RD6 677 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 KCNS3Q9BQ31 491 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 MARVELD1Q9BSK0 173 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 TBL1XR1Q9BZK7 514 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 SLC19A3Q9BZV2 496 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 TUBA4BQ9H853 241 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 POLE4Q9NR33 117 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 SLC35D1Q9NTN3 355 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 HRASLS2Q9NWW9 162 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 SLC17A7Q9P2U7 560 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 STX18Q9P2W9 335 aaKnown RBP0.26□□□□□ -2.37
HPS3-205ENST00000478525 LGALS13Q9UHV8 139 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 FBXL3Q9UKT7 428 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 LRRC42Q9Y546 428 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 FHOD3Q2V2M9 1422 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 ATP10AO60312 1499 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 ABCC9O60706 1549 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 MALRD1Q5VYJ5 2156 aa0.26□□□□□ -2.37
HPS3-205ENST00000478525 COL6A6A6NMZ7 2263 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 CAMTA1Q9Y6Y1 1673 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms