RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 CDC14BO60729 498 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 TUBG1P23258 451 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 PDLIM4P50479 330 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 SNRPGP62308 76 aaKnown RBP8.74□□□□□ -1.01
HDAC6-222ENST00000478095 ZNF92Q03936 586 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 SLC34A1Q06495 639 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 ZNF322Q6U7Q0 402 aaPredicted RBP8.74□□□□□ -1.01
HDAC6-222ENST00000478095 PLEKHG7Q6ZR37 379 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 PGAP1Q75T13 922 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 SSX6Q7RTT6 188 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 PRSS45Q7RTY3 260 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 PACRGLQ8N7B6 248 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 OR2Z1Q8NG97 314 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 OR10H4Q8NGA5 316 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 C10orf105Q8TEF2 133 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 UBASH3BQ8TF42 649 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 RFKQ969G6 155 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 C18orf12Q96KH6 178 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 COX4I2Q96KJ9 171 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 OR8B4Q96RC9 309 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 SMR3AQ99954 134 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 REG4Q9BYZ8 158 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 TUBG2Q9NRH3 451 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 CYSLTR2Q9NS75 346 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 DECR2Q9NUI1 292 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 CLN6Q9NWW5 311 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 HAO2Q9NYQ3 351 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 TREM2Q9NZC2 230 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 TMEM14AQ9Y6G1 99 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 CELSR1Q9NYQ6 3014 aa8.74□□□□□ -1.01
HDAC6-222ENST00000478095 HEATR1Q9H583 2144 aaKnown RBP8.74□□□□□ -1.01
HDAC6-222ENST00000478095 ARID1AO14497 2285 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 IGHV3-64DA0A0J9YX35 117 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 IQCF6A8MYZ5 107 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 H0YL77 283 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 SLC16A6O15403 523 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 CSF3P09919 207 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 GABRB1P18505 474 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 COL8A2P25067 703 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 RBMXP38159 391 aaKnown RBP8.73□□□□□ -1.01
HDAC6-222ENST00000478095 MTNR1AP48039 350 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 DSCR9P59020 149 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 PSMA6P60900 246 aaKnown RBP8.73□□□□□ -1.01
HDAC6-222ENST00000478095 TNFAIP6P98066 277 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-222ENST00000478095 IL5RAQ01344 420 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 OCLNQ16625 522 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 TIGD6Q17RP2 521 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 PCGF3Q3KNV8 242 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 SPRNQ5BIV9 151 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 ZMAT1Q5H9K5 638 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 KCTD18Q6PI47 426 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-222ENST00000478095 RHOUQ7L0Q8 258 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 ZNF771Q7L3S4 317 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-222ENST00000478095 OR8G5Q8NG78 346 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 OR10AD1Q8NGE0 317 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 ASB17Q8WXJ9 295 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 YIPF5Q969M3 257 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 RNFT2Q96EX2 444 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 ELMOD3Q96FG2 381 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 PGAM5Q96HS1 289 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 RDH12Q96NR8 316 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 APOL4Q9BPW4 351 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 PIMREGQ9BSJ6 248 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 MROQ9BYG7 248 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 BPESC1Q9GZL8 116 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 SAP30LQ9HAJ7 183 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 RNPEPL1Q9HAU8 725 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 AMBNQ9NP70 447 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 MYOZ1Q9NP98 299 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-222ENST00000478095 ZNF319Q9P2F9 582 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 CGGBP1Q9UFW8 167 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-222ENST00000478095 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.73□□□□□ -1.01
HDAC6-222ENST00000478095 CACNG2Q9Y698 323 aa8.73□□□□□ -1.01
HDAC6-222ENST00000478095 RTTNQ86VV8 2226 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 LOC390937A0A1W2PQ73 354 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 A0A1W2PQL4 384 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-222ENST00000478095 GGT3PA6NGU5 568 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 CD300LBA8K4G0 201 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 PHYHO14832 338 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 XRCC2O43543 280 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 APOC1P02654 83 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 HLA-DPB1P04440 258 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 INHBBP09529 407 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 SLC25A16P16260 332 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 SELEP16581 610 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 LIPAP38571 399 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 RIDAP52758 137 aaKnown RBP8.72□□□□□ -1.01
HDAC6-222ENST00000478095 ROM1Q03395 351 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 ZNF91Q05481 1191 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 MFGE8Q08431 387 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-222ENST00000478095 POU4F2Q12837 409 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 SLC25A30Q5SVS4 291 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 MEDAGQ5VYS4 303 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 ZNF679Q8IYX0 411 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 ZNF786Q8N393 782 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 DHRSXQ8N5I4 330 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 OR8B12Q8NGG6 310 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 OR56B2PQ8NGI1 322 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 RHOXF1Q8NHV9 184 aa8.72□□□□□ -1.01
HDAC6-222ENST00000478095 CNIH3Q8TBE1 160 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms