RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 ZNF319Q9P2F9 582 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 PLEKHB1Q9UF11 243 aaPredicted RBP13.95□□□□□ -0.18
VHL-203ENST00000477538 ST6GALNAC2Q9UJ37 374 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 POU2F3Q9UKI9 436 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 ATP23Q9Y6H3 246 aa13.95□□□□□ -0.18
VHL-203ENST00000477538 TRBV2A0A0J9YWF9 115 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 TRIM64CA6NLI5 447 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 XRCC2O43543 280 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 GPRIN2O60269 458 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 PLAUP00749 431 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 HSMCR30P0CW71 290 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 COL8A1P27658 744 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 CCR9P51686 369 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 ERVS71-1P61550 626 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 RPS23P62266 143 aaKnown RBP13.94□□□□□ -0.18
VHL-203ENST00000477538 MALLQ13021 153 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 NEDD8Q15843 81 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 TIGD6Q17RP2 521 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 GFOD2Q3B7J2 385 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 GLYATL3Q5SZD4 288 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 SPATA46Q5T0L3 261 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 UBE2UQ5VVX9 321 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 RPL22L1Q6P5R6 122 aaKnown RBP13.94□□□□□ -0.18
VHL-203ENST00000477538 C1orf174Q8IYL3 243 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 ELMOD2Q8IZ81 293 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 ZFP41Q8N8Y5 198 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 OR2AE1Q8NHA4 323 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 SLC25A40Q8TBP6 338 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 MRPS26Q9BYN8 205 aaKnown RBP13.94□□□□□ -0.18
VHL-203ENST00000477538 POFUT1Q9H488 388 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 VCX3AQ9NNX9 186 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 PTTG3PQ9NZH4 202 aa13.94□□□□□ -0.18
VHL-203ENST00000477538 SIRT4Q9Y6E7 314 aaPredicted RBP13.94□□□□□ -0.18
VHL-203ENST00000477538 HRNRQ86YZ3 2850 aaPredicted RBP13.93□□□□□ -0.18
VHL-203ENST00000477538 A0A0U1RQV5 110 aa13.93□□□□□ -0.18
VHL-203ENST00000477538 PNMA8CA0A1B0GUJ8 204 aa13.93□□□□□ -0.18
VHL-203ENST00000477538 OR4C45A6NMZ5 311 aa13.93□□□□□ -0.18
VHL-203ENST00000477538 OGG1O15527 345 aa13.93□□□□□ -0.18
VHL-203ENST00000477538 ATE1O95260 518 aa13.93□□□□□ -0.18
VHL-203ENST00000477538 GLRXP35754 106 aa13.93□□□□□ -0.18
VHL-203ENST00000477538 MLLT11Q13015 90 aaPredicted RBP13.93□□□□□ -0.18
VHL-203ENST00000477538 ODF4Q2M2E3 257 aa13.93□□□□□ -0.18
VHL-203ENST00000477538 DMKNQ6E0U4 476 aaPredicted RBP13.93□□□□□ -0.18
VHL-203ENST00000477538 RGS7BPQ6MZT1 257 aaPredicted RBP13.93□□□□□ -0.18
VHL-203ENST00000477538 VHLLQ6RSH7 139 aa13.93□□□□□ -0.18
VHL-203ENST00000477538 ZNF704Q6ZNC4 412 aaPredicted RBP13.93□□□□□ -0.18
VHL-203ENST00000477538 RPS4Y2Q8TD47 263 aa13.93□□□□□ -0.18
VHL-203ENST00000477538 SMIM19Q96E16 107 aa13.93□□□□□ -0.18
VHL-203ENST00000477538 OPALINQ96PE5 141 aa13.93□□□□□ -0.18
VHL-203ENST00000477538 MGLLQ99685 303 aa13.93□□□□□ -0.18
VHL-203ENST00000477538 OR2J1Q9GZK6 312 aa13.93□□□□□ -0.18
VHL-203ENST00000477538 ISYNA1Q9NPH2 558 aa13.93□□□□□ -0.18
VHL-203ENST00000477538 TMEM212A6NML5 194 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 INMTO95050 263 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 UBCP0CG48 685 aaKnown RBP13.92□□□□□ -0.18
VHL-203ENST00000477538 CELP19835 753 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 TUBG1P23258 451 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 PSMB9P28065 219 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 THBS4P35443 961 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 ZNF92Q03936 586 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 ZNF718Q3SXZ3 478 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 COMMD2Q86X83 199 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 ZNF676Q8N7Q3 588 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 OR5AK2Q8NH90 309 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 OR51E1Q8TCB6 317 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 AKAP1Q92667 903 aaKnown RBP eCLIP13.92□□□□□ -0.18
VHL-203ENST00000477538 NEUROG1Q92886 237 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 UFD1Q92890 307 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 SGK3Q96BR1 496 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 MARS2Q96GW9 593 aaKnown RBP13.92□□□□□ -0.18
VHL-203ENST00000477538 REEP6Q96HR9 211 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 PDCD1LG2Q9BQ51 273 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 COMMD4Q9H0A8 199 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 RGCCQ9H4X1 137 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 OPA3Q9H6K4 179 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 ZNF442Q9H7R0 627 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 TUBG2Q9NRH3 451 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 CA10Q9NS85 328 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 ZNF391Q9UJN7 358 aa13.92□□□□□ -0.18
VHL-203ENST00000477538 CACNA1DQ01668 2161 aa13.91□□□□□ -0.18
VHL-203ENST00000477538 FAM221AA4D161 298 aa13.91□□□□□ -0.18
VHL-203ENST00000477538 E7EQL1 145 aa13.91□□□□□ -0.18
VHL-203ENST00000477538 H3BSA7 217 aa13.91□□□□□ -0.18
VHL-203ENST00000477538 P2RY10O00398 339 aa13.91□□□□□ -0.18
VHL-203ENST00000477538 PLPP2O43688 288 aa13.91□□□□□ -0.18
VHL-203ENST00000477538 ZFPL1O95159 310 aa13.91□□□□□ -0.18
VHL-203ENST00000477538 SLC3A1Q07837 685 aa13.91□□□□□ -0.18
VHL-203ENST00000477538 GK2Q14410 553 aaPredicted RBP13.91□□□□□ -0.18
VHL-203ENST00000477538 HLXQ14774 488 aaPredicted RBP13.91□□□□□ -0.18
VHL-203ENST00000477538 ZNF672Q499Z4 452 aaPredicted RBP13.91□□□□□ -0.18
VHL-203ENST00000477538 ARMCX4Q5H9R4 360 aa13.91□□□□□ -0.18
VHL-203ENST00000477538 FBXW12Q6X9E4 464 aa13.91□□□□□ -0.18
VHL-203ENST00000477538 PGAP1Q75T13 922 aa13.91□□□□□ -0.18
VHL-203ENST00000477538 MRPL21Q7Z2W9 205 aaKnown RBP13.91□□□□□ -0.18
VHL-203ENST00000477538 LILRB1Q8NHL6 650 aaPredicted RBP13.91□□□□□ -0.18
VHL-203ENST00000477538 TMEM171Q8WVE6 324 aa13.91□□□□□ -0.18
VHL-203ENST00000477538 MUL1Q969V5 352 aa13.91□□□□□ -0.18
VHL-203ENST00000477538 SPSB4Q96A44 273 aa13.91□□□□□ -0.18
VHL-203ENST00000477538 LYZL4Q96KX0 146 aa13.91□□□□□ -0.18
VHL-203ENST00000477538 GPR84Q9NQS5 396 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms