RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 ZNF48Q96MX3 618 aaPredicted RBP5.53□□□□□ -1.52
CLDN4-205ENST00000476494 OR2M2Q96R28 347 aa5.53□□□□□ -1.52
CLDN4-205ENST00000476494 INTS14Q96SY0 518 aa5.53□□□□□ -1.52
CLDN4-205ENST00000476494 MGLLQ99685 303 aa5.53□□□□□ -1.52
CLDN4-205ENST00000476494 USB1Q9BQ65 265 aaKnown RBP5.53□□□□□ -1.52
CLDN4-205ENST00000476494 BCL7BQ9BQE9 202 aa5.53□□□□□ -1.52
CLDN4-205ENST00000476494 EMC6Q9BV81 110 aa5.53□□□□□ -1.52
CLDN4-205ENST00000476494 WDR76Q9H967 626 aa5.53□□□□□ -1.52
CLDN4-205ENST00000476494 ZMAT3Q9HA38 289 aaKnown RBP5.53□□□□□ -1.52
CLDN4-205ENST00000476494 ERVK13-1Q9NX77 482 aa5.53□□□□□ -1.52
CLDN4-205ENST00000476494 NOSIPQ9Y314 301 aaKnown RBP5.53□□□□□ -1.52
CLDN4-205ENST00000476494 GRIP1Q9Y3R0 1128 aa5.53□□□□□ -1.52
CLDN4-205ENST00000476494 ARPC4-TTLL3A0A0A6YYG9 625 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 IGHV3-15A0A0B4J1V0 119 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 LCE6AA0A183 80 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 RPL36A-HNRNPH2H7BZ11 118 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 H7C1C5 153 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 ZNF593O00488 134 aaPredicted RBP5.52□□□□□ -1.53
CLDN4-205ENST00000476494 DHHO43323 396 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 NOL3O60936 208 aaKnown RBP5.52□□□□□ -1.53
CLDN4-205ENST00000476494 ZNF254O75437 659 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 PNPP00491 289 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 SCG5P05408 212 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 QDPRP09417 244 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 LIMS3P0CW19 117 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 LIMS4P0CW20 117 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 BMP4P12644 408 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 CTLA4P16410 223 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 SELEP16581 610 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 ADRA2CP18825 462 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 ALOX5APP20292 161 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 CD40P25942 277 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 PSMB9P28065 219 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 AGTR1P30556 359 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 PYCR1P32322 319 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 MAP2K4P45985 399 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 ENTPD1P49961 510 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 ETV1P50549 477 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 TMBIM6P55061 237 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 LSM6P62312 80 aaKnown RBP5.52□□□□□ -1.53
CLDN4-205ENST00000476494 LCN6P62502 163 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 MLLT11Q13015 90 aaPredicted RBP5.52□□□□□ -1.53
CLDN4-205ENST00000476494 TPBGQ13641 420 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 RAB39AQ14964 217 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 PPA1Q15181 289 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 MED22Q15528 200 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 TRAM1Q15629 374 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 TAF9Q16594 264 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 TIGD6Q17RP2 521 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 TIMM50Q3ZCQ8 353 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 CDONQ4KMG0 1287 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 CCDC58Q4VC31 144 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 SLC18B1Q6NT16 456 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 FAHD2BQ6P2I3 314 aaPredicted RBP5.52□□□□□ -1.53
CLDN4-205ENST00000476494 KCTD18Q6PI47 426 aaPredicted RBP5.52□□□□□ -1.53
CLDN4-205ENST00000476494 LRFN4Q6PJG9 635 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 ZNF322Q6U7Q0 402 aaPredicted RBP5.52□□□□□ -1.53
CLDN4-205ENST00000476494 GDPGP1Q6ZNW5 385 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 FOXL2NBQ6ZUU3 175 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 LHFPL3Q86UP9 236 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 ERI1Q8IV48 349 aaKnown RBP5.52□□□□□ -1.53
CLDN4-205ENST00000476494 SLC35F2Q8IXU6 374 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 PIAS4Q8N2W9 510 aaPredicted RBP5.52□□□□□ -1.53
CLDN4-205ENST00000476494 GPR137CQ8N3F9 429 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 ZNF511Q8NB15 262 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 SLC26A10Q8NG04 563 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 OR51L1Q8NGJ5 315 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 OTOSQ8NHW6 89 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 FAM110DQ8TAY7 271 aaPredicted RBP5.52□□□□□ -1.53
CLDN4-205ENST00000476494 SNX33Q8WV41 574 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 SGCDQ92629 289 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 APH1AQ96BI3 265 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 FAHD2AQ96GK7 314 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 TSSK2Q96PF2 358 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 ZNF385AQ96PM9 386 aaKnown RBP5.52□□□□□ -1.53
CLDN4-205ENST00000476494 ALG8Q9BVK2 526 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 CDADC1Q9BWV3 514 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 ULBP2Q9BZM5 246 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 RERGLQ9H628 205 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 AURKAIP1Q9NWT8 199 aaPredicted RBP5.52□□□□□ -1.53
CLDN4-205ENST00000476494 BABAM2Q9NXR7 383 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 OPN4Q9UHM6 478 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 LAMP5Q9UJQ1 280 aa5.52□□□□□ -1.53
CLDN4-205ENST00000476494 COA3Q9Y2R0 106 aaPredicted RBP5.52□□□□□ -1.53
CLDN4-205ENST00000476494 LSM2Q9Y333 95 aaKnown RBP5.52□□□□□ -1.53
CLDN4-205ENST00000476494 STAB2Q8WWQ8 2551 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 A0A1B0GUS0 222 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 A0A1W2PQL4 384 aaPredicted RBP5.51□□□□□ -1.53
CLDN4-205ENST00000476494 METTL15A6NJ78 407 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 C3orf84H3BNL1 204 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 DCTN6O00399 190 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 CCRL2O00421 344 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 WNT9BO14905 357 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 SELENOFO60613 162 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 KRT33AO76009 404 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 INMTO95050 263 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 KNG1P01042 644 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 PTHP01270 115 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 TFP02787 698 aa5.51□□□□□ -1.53
CLDN4-205ENST00000476494 KRT8P05787 483 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms