RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 PARP16Q8N5Y8 322 aa11.97□□□□□ -0.49
TRAF4-210ENST00000475329 CPEB3Q8NE35 698 aaKnown RBP11.97□□□□□ -0.49
TRAF4-210ENST00000475329 C1orf162Q8NEQ5 155 aaPredicted RBP11.97□□□□□ -0.49
TRAF4-210ENST00000475329 OR1J2Q8NGS2 313 aa11.97□□□□□ -0.49
TRAF4-210ENST00000475329 FGGYQ96C11 551 aa11.97□□□□□ -0.49
TRAF4-210ENST00000475329 STARD4Q96DR4 205 aa11.97□□□□□ -0.49
TRAF4-210ENST00000475329 FAM71F1Q96KD3 344 aaPredicted RBP11.97□□□□□ -0.49
TRAF4-210ENST00000475329 GFI1Q99684 422 aa11.97□□□□□ -0.49
TRAF4-210ENST00000475329 NOX3Q9HBY0 568 aa11.97□□□□□ -0.49
TRAF4-210ENST00000475329 PALMDQ9NP74 551 aa11.97□□□□□ -0.49
TRAF4-210ENST00000475329 ABRACLQ9P1F3 81 aa11.97□□□□□ -0.49
TRAF4-210ENST00000475329 EPG5Q9HCE0 2579 aa11.97□□□□□ -0.49
TRAF4-210ENST00000475329 C5orf63A6NC05 138 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 ZNF503-AS2A6NEH8 195 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 IFITM5A6NNB3 132 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 HPGDSO60760 199 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 RAD51DO75771 328 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 LYZL6O75951 148 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 TOXO94900 526 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 CGAP01215 116 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 LCATP04180 440 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 SFTPCP11686 197 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 ANOS1P23352 680 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 CD40LGP29965 261 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 CEACAM8P31997 349 aaPredicted RBP11.96□□□□□ -0.49
TRAF4-210ENST00000475329 GNALP38405 381 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 UBE2NP61088 152 aaKnown RBP11.96□□□□□ -0.49
TRAF4-210ENST00000475329 HGFACQ04756 655 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 GSG1Q2KHT4 349 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 SNAI3Q3KNW1 292 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 HES5Q5TA89 166 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 ASPHD2Q6ICH7 369 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 C16orf87Q6PH81 154 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 SERPINA12Q8IW75 414 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 GABRG1Q8N1C3 465 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 RPRMLQ8N4K4 120 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 PLPP7Q8NBV4 271 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 TRMT10AQ8TBZ6 339 aaKnown RBP11.96□□□□□ -0.49
TRAF4-210ENST00000475329 LYZL4Q96KX0 146 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 MRI1Q9BV20 369 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 SFXN3Q9BWM7 321 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 PLEKHA1Q9HB21 404 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 ZNF391Q9UJN7 358 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 ZNF835Q9Y2P0 537 aa11.96□□□□□ -0.49
TRAF4-210ENST00000475329 MAP1BP46821 2468 aaKnown RBP11.95□□□□□ -0.5
TRAF4-210ENST00000475329 MEGF11A6BM72 1044 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 E9PLN8 166 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 DHRS3O75911 302 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 GLI4P10075 376 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 EDN3P14138 238 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 HOXB1P14653 301 aaPredicted RBP11.95□□□□□ -0.5
TRAF4-210ENST00000475329 STOMP27105 288 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 HOXC12P31275 282 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 DDOSTP39656 456 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 PPP5CP53041 499 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 GABRA6Q16445 453 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 C3P1Q6ZMU1 363 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 Q6ZSR3 168 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 BEND4Q6ZU67 534 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 MDP1Q86V88 176 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 DOLPP1Q86YN1 238 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 NKAIN3Q8N8D7 197 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 NAXEQ8NCW5 288 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 DNAAF1Q8NEP3 725 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 OR14K1Q8NGZ2 314 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 ZNF671Q8TAW3 534 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 ADAT3Q96EY9 351 aaPredicted RBP11.95□□□□□ -0.5
TRAF4-210ENST00000475329 DIRAS2Q96HU8 199 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 BOD1Q96IK1 185 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 OPN3Q9H1Y3 402 aaPredicted RBP11.95□□□□□ -0.5
TRAF4-210ENST00000475329 RGCCQ9H4X1 137 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 B3GNT2Q9NY97 397 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 V9GYS6 101 aa11.95□□□□□ -0.5
TRAF4-210ENST00000475329 CHD8Q9HCK8 2581 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 LOC100509620A0A075B734 347 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 LOC390937A0A1W2PQ73 354 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 FAM25AB3EWG3 89 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 FAM25CB3EWG5 89 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 FAM25GB3EWG6 89 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 XRCC2O43543 280 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 MTRF1O75570 445 aaKnown RBP11.94□□□□□ -0.5
TRAF4-210ENST00000475329 SNRPBP14678 240 aaKnown RBP11.94□□□□□ -0.5
TRAF4-210ENST00000475329 CFPP27918 469 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 APLNRP35414 380 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 THBS4P35443 961 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 P2RY6Q15077 328 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 GLT8D1Q68CQ7 371 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 CNIH2Q6PI25 160 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 PGAP1Q75T13 922 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 LRRC28Q86X40 367 aaPredicted RBP11.94□□□□□ -0.5
TRAF4-210ENST00000475329 CXorf67Q86X51 503 aaPredicted RBP11.94□□□□□ -0.5
TRAF4-210ENST00000475329 C17orf78Q8N4C9 275 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 SAMD12Q8N8I0 201 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 ZNF610Q8N9Z0 462 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 OR1M1Q8NGA1 313 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 OR5D14Q8NGL3 314 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 LGALS14Q8TCE9 139 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 AKAP1Q92667 903 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRAF4-210ENST00000475329 SGK3Q96BR1 496 aa11.94□□□□□ -0.5
TRAF4-210ENST00000475329 C10orf35Q96D05 121 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms