RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 POM121CA8CG34 1229 aa17.07■□□□□ 0.32
APP-215ENST00000474136 LCKP06239 509 aa17.07■□□□□ 0.32
APP-215ENST00000474136 IL13RA1P78552 427 aa17.07■□□□□ 0.32
APP-215ENST00000474136 HFEQ30201 348 aa17.07■□□□□ 0.32
APP-215ENST00000474136 KLHL12Q53G59 568 aa17.07■□□□□ 0.32
APP-215ENST00000474136 KLF17Q5JT82 389 aaPredicted RBP17.07■□□□□ 0.32
APP-215ENST00000474136 DEFB108BQ8NET1 73 aa17.07■□□□□ 0.32
APP-215ENST00000474136 BPIFB6Q8NFQ5 453 aa17.07■□□□□ 0.32
APP-215ENST00000474136 IPCEF1Q8WWN9 437 aaPredicted RBP17.07■□□□□ 0.32
APP-215ENST00000474136 TMEM54Q969K7 222 aa17.07■□□□□ 0.32
APP-215ENST00000474136 TIMD4Q96H15 378 aa17.07■□□□□ 0.32
APP-215ENST00000474136 TEAD3Q99594 435 aa17.07■□□□□ 0.32
APP-215ENST00000474136 OR51V1Q9H2C8 321 aa17.07■□□□□ 0.32
APP-215ENST00000474136 SAP30LQ9HAJ7 183 aa17.07■□□□□ 0.32
APP-215ENST00000474136 CCNB1IP1Q9NPC3 277 aa17.07■□□□□ 0.32
APP-215ENST00000474136 MMP26Q9NRE1 261 aa17.07■□□□□ 0.32
APP-215ENST00000474136 SLCO1C1Q9NYB5 712 aa17.07■□□□□ 0.32
APP-215ENST00000474136 CNOT2Q9NZN8 540 aaKnown RBP17.07■□□□□ 0.32
APP-215ENST00000474136 DNAJC27Q9NZQ0 273 aa17.07■□□□□ 0.32
APP-215ENST00000474136 FBXL3Q9UKT7 428 aa17.07■□□□□ 0.32
APP-215ENST00000474136 NUP50Q9UKX7 468 aa17.07■□□□□ 0.32
APP-215ENST00000474136 ISPDA4D126 451 aa17.06■□□□□ 0.32
APP-215ENST00000474136 SLC1A7O00341 560 aa17.06■□□□□ 0.32
APP-215ENST00000474136 SLC16A7O60669 478 aa17.06■□□□□ 0.32
APP-215ENST00000474136 FAM20BO75063 409 aa17.06■□□□□ 0.32
APP-215ENST00000474136 KHDRBS3O75525 346 aaKnown RBP17.06■□□□□ 0.32
APP-215ENST00000474136 GLCEO94923 617 aa17.06■□□□□ 0.32
APP-215ENST00000474136 SPI1P17947 270 aa17.06■□□□□ 0.32
APP-215ENST00000474136 MDKP21741 143 aaPredicted RBP17.06■□□□□ 0.32
APP-215ENST00000474136 GUCA1AP43080 201 aaPredicted RBP17.06■□□□□ 0.32
APP-215ENST00000474136 MTNR1AP48039 350 aa17.06■□□□□ 0.32
APP-215ENST00000474136 ZNF133P52736 654 aaPredicted RBP17.06■□□□□ 0.32
APP-215ENST00000474136 RPS7P62081 194 aaKnown RBP17.06■□□□□ 0.32
APP-215ENST00000474136 APOFQ13790 326 aa17.06■□□□□ 0.32
APP-215ENST00000474136 SYT14Q8NB59 555 aa17.06■□□□□ 0.32
APP-215ENST00000474136 PROKR2Q8NFJ6 384 aa17.06■□□□□ 0.32
APP-215ENST00000474136 CCL17Q92583 94 aa17.06■□□□□ 0.32
APP-215ENST00000474136 SH3GL3Q99963 347 aa17.06■□□□□ 0.32
APP-215ENST00000474136 NUAK2Q9H093 628 aa17.06■□□□□ 0.32
APP-215ENST00000474136 CDH20Q9HBT6 801 aa17.06■□□□□ 0.32
APP-215ENST00000474136 SRA1Q9HD15 236 aaKnown RBP17.06■□□□□ 0.32
APP-215ENST00000474136 MRPS18AQ9NVS2 196 aaKnown RBP17.06■□□□□ 0.32
APP-215ENST00000474136 B9D1Q9UPM9 204 aa17.06■□□□□ 0.32
APP-215ENST00000474136 MRPS14O60783 128 aaKnown RBP17.05■□□□□ 0.32
APP-215ENST00000474136 RNASE1P07998 156 aaKnown RBP17.05■□□□□ 0.32
APP-215ENST00000474136 OR8G3PP0DMU2 310 aa17.05■□□□□ 0.32
APP-215ENST00000474136 PIPP12273 146 aaPredicted RBP17.05■□□□□ 0.32
APP-215ENST00000474136 SLC2A5P22732 501 aa17.05■□□□□ 0.32
APP-215ENST00000474136 CRHBPP24387 322 aa17.05■□□□□ 0.32
APP-215ENST00000474136 FMO3P31513 532 aa17.05■□□□□ 0.32
APP-215ENST00000474136 ATP6V1E1P36543 226 aa17.05■□□□□ 0.32
APP-215ENST00000474136 GABARAPL2P60520 117 aa17.05■□□□□ 0.32
APP-215ENST00000474136 SRSF4Q08170 494 aaKnown RBP17.05■□□□□ 0.32
APP-215ENST00000474136 RAB40BQ12829 278 aa17.05■□□□□ 0.32
APP-215ENST00000474136 KCTD21Q4G0X4 260 aa17.05■□□□□ 0.32
APP-215ENST00000474136 ARMCX4Q5H9R4 360 aa17.05■□□□□ 0.32
APP-215ENST00000474136 OR6V1Q8N148 313 aa17.05■□□□□ 0.32
APP-215ENST00000474136 SLC22A24Q8N4F4 322 aa17.05■□□□□ 0.32
APP-215ENST00000474136 OR9Q1Q8NGQ5 310 aa17.05■□□□□ 0.32
APP-215ENST00000474136 C11orf40Q8WZ69 217 aa17.05■□□□□ 0.32
APP-215ENST00000474136 MYDGFQ969H8 173 aa17.05■□□□□ 0.32
APP-215ENST00000474136 SLITRK2Q9H156 845 aa17.05■□□□□ 0.32
APP-215ENST00000474136 MED20Q9H944 212 aa17.05■□□□□ 0.32
APP-215ENST00000474136 ZMAT3Q9HA38 289 aaKnown RBP17.05■□□□□ 0.32
APP-215ENST00000474136 H7C1C5 153 aa17.04■□□□□ 0.32
APP-215ENST00000474136 QDPRP09417 244 aa17.04■□□□□ 0.32
APP-215ENST00000474136 DBTP11182 482 aaKnown RBP17.04■□□□□ 0.32
APP-215ENST00000474136 RBMXP38159 391 aaKnown RBP17.04■□□□□ 0.32
APP-215ENST00000474136 ZNF84P51523 738 aa17.04■□□□□ 0.32
APP-215ENST00000474136 LCN6P62502 163 aa17.04■□□□□ 0.32
APP-215ENST00000474136 LAIR2Q6ISS4 152 aa17.04■□□□□ 0.32
APP-215ENST00000474136 MCHR2Q969V1 340 aa17.04■□□□□ 0.32
APP-215ENST00000474136 NMD3Q96D46 503 aaKnown RBP17.04■□□□□ 0.32
APP-215ENST00000474136 ELMOD3Q96FG2 381 aa17.04■□□□□ 0.32
APP-215ENST00000474136 MYCBPQ99417 103 aaPredicted RBP17.04■□□□□ 0.32
APP-215ENST00000474136 HCAR1Q9BXC0 346 aa17.04■□□□□ 0.32
APP-215ENST00000474136 PLEK2Q9NYT0 353 aa17.04■□□□□ 0.32
APP-215ENST00000474136 AASSQ9UDR5 926 aa17.04■□□□□ 0.32
APP-215ENST00000474136 PSORS1C1Q9UIG5 152 aa17.04■□□□□ 0.32
APP-215ENST00000474136 SOX21Q9Y651 276 aaPredicted RBP17.04■□□□□ 0.32
APP-215ENST00000474136 MAGEA13PA6NCF6 341 aa17.03■□□□□ 0.32
APP-215ENST00000474136 SPRY3O43610 288 aa17.03■□□□□ 0.32
APP-215ENST00000474136 FADS2O95864 444 aaKnown RBP17.03■□□□□ 0.32
APP-215ENST00000474136 OMGP23515 440 aa17.03■□□□□ 0.32
APP-215ENST00000474136 UCP2P55851 309 aa17.03■□□□□ 0.32
APP-215ENST00000474136 ZNF91Q05481 1191 aa17.03■□□□□ 0.32
APP-215ENST00000474136 SLC9A3R2Q15599 337 aa17.03■□□□□ 0.32
APP-215ENST00000474136 SMN1Q16637 294 aaKnown RBP17.03■□□□□ 0.32
APP-215ENST00000474136 C10orf128Q5T292 105 aa17.03■□□□□ 0.32
APP-215ENST00000474136 SLC25A47Q6Q0C1 308 aa17.03■□□□□ 0.32
APP-215ENST00000474136 BCDIN3DQ7Z5W3 292 aaKnown RBP17.03■□□□□ 0.32
APP-215ENST00000474136 GLB1L2Q8IW92 636 aa17.03■□□□□ 0.32
APP-215ENST00000474136 BBS1Q8NFJ9 593 aa17.03■□□□□ 0.32
APP-215ENST00000474136 OR6K6Q8NGW6 343 aa17.03■□□□□ 0.32
APP-215ENST00000474136 ST7LQ8TDW4 575 aa17.03■□□□□ 0.32
APP-215ENST00000474136 SLC25A28Q96A46 364 aa17.03■□□□□ 0.32
APP-215ENST00000474136 DUSP21Q9H596 190 aa17.03■□□□□ 0.32
APP-215ENST00000474136 RNF121Q9H920 327 aa17.03■□□□□ 0.32
APP-215ENST00000474136 PURGQ9UJV8 347 aaKnown RBP17.03■□□□□ 0.32
APP-215ENST00000474136 PCDHGB5Q9Y5G0 923 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms