RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 IGLV3-22A0A075B6J6 115 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 KCNE1BA0A087WTH5 132 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 TRAV39A0A0B4J263 110 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 A0A0G2JND7 137 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 GLYATL1P3A0A0U1RQE8 302 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 ISPDA4D126 451 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 GOLGA8JA6NMD2 632 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 M0R3G1 203 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 CCRL2O00421 344 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 TRDMT1O14717 391 aaKnown RBP3.07□□□□□ -1.92
BRCA1-212ENST00000473961 SLC9A3R1O14745 358 aaPredicted RBP3.07□□□□□ -1.92
BRCA1-212ENST00000473961 NDUFA2O43678 99 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 FAM189A1O60320 539 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 TSPAN13O95857 204 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 LY6G6DO95868 133 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 HMGN1P05114 100 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 GZMAP12544 262 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 ATF6P18850 670 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 MSR1P21757 451 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 BCKDHBP21953 392 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 HTR1EP28566 365 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 CD1BP29016 333 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 SERPINB1P30740 379 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 SERPINB5P36952 375 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 COILP38432 576 aaPredicted RBP3.07□□□□□ -1.92
BRCA1-212ENST00000473961 ETV1P50549 477 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 HADHBP55084 474 aaKnown RBP3.07□□□□□ -1.92
BRCA1-212ENST00000473961 DSCR10P59022 87 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 RAB11AP62491 216 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 ACTA2P62736 377 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 ACTG2P63267 376 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 ACTC1P68032 377 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 ACTA1P68133 377 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 TCP10Q12799 353 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 SMARCB1Q12824 385 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 KRR1Q13601 381 aaKnown RBP3.07□□□□□ -1.92
BRCA1-212ENST00000473961 GNA13Q14344 377 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 POU6F1Q14863 301 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 STK11Q15831 433 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 RAB11BQ15907 218 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 EXOC3L4Q17RC7 722 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 CLVS2Q5SYC1 327 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 STUMQ69YW2 141 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 SPESP1Q6UW49 350 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 HDDC2Q7Z4H3 204 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 VTCN1Q7Z7D3 282 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 SETD3Q86TU7 594 aaPredicted RBP3.07□□□□□ -1.92
BRCA1-212ENST00000473961 PQLC3Q8N755 202 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 PRELID2Q8N945 189 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 SNX31Q8N9S9 440 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 OR2G3Q8NGZ4 309 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 LHFPL5Q8TAF8 219 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 ZNF502Q8TBZ5 544 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 PYDC1Q8WXC3 89 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 CIDECQ96AQ7 238 aaPredicted RBP3.07□□□□□ -1.92
BRCA1-212ENST00000473961 TMIGD2Q96BF3 282 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 RMND5BQ96G75 393 aaPredicted RBP3.07□□□□□ -1.92
BRCA1-212ENST00000473961 CEP170P1Q96L14 293 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 SERPINI1Q99574 410 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 ZNF717Q9BY31 904 aaPredicted RBP3.07□□□□□ -1.92
BRCA1-212ENST00000473961 YTHDF1Q9BYJ9 559 aaKnown RBP3.07□□□□□ -1.92
BRCA1-212ENST00000473961 IL22Q9GZX6 179 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 DEFB127Q9H1M4 99 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 LRRC19Q9H756 370 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 CXorf21Q9HAI6 301 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 PARVAQ9NVD7 372 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 AP3M1Q9Y2T2 418 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 MYO3BQ8WXR4 1341 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 C10orf71Q711Q0 1435 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 PTPRMP28827 1452 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 LRRC37A3O60309 1634 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 IGLV3-10A0A075B6K4 115 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 A0A0G2JN53 185 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 C1orf232A0A0U1RR37 186 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 A0A1B0GUL6 1792 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 EXOC1LA0A1B0GW35 172 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 TRPC5OSA6NMA1 111 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 CENPXA8MT69 81 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 LAD1O00515 517 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 EMC8O43402 210 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 NMT2O60551 498 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 SLIT1O75093 1534 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 SUPT7LO94864 414 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 CCNB2O95067 398 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 PAHP00439 452 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 IFNA16P05015 189 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 SERPINA6P08185 405 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 RPS17P08708 135 aaKnown RBP3.06□□□□□ -1.92
BRCA1-212ENST00000473961 SNRPAP09012 282 aaKnown RBP3.06□□□□□ -1.92
BRCA1-212ENST00000473961 RGPD1P0DJD0 1748 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 GFAPP14136 432 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 KLK2P20151 261 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 EVI2BP34910 448 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 RPA3P35244 121 aaPredicted RBP3.06□□□□□ -1.92
BRCA1-212ENST00000473961 HAAOP46952 286 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 RORCP51449 518 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 CCR8P51685 355 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 CLDN8P56748 225 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 STXBP1P61764 594 aaKnown RBP3.06□□□□□ -1.92
BRCA1-212ENST00000473961 CNTNAP1P78357 1384 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms