RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 CDK5R1Q15078 307 aa11.79□□□□□ -0.52
LINC00173-201ENST00000470091 TIMM50Q3ZCQ8 353 aa11.79□□□□□ -0.52
LINC00173-201ENST00000470091 C9orf135Q5VTT2 229 aa11.79□□□□□ -0.52
LINC00173-201ENST00000470091 AGAP6Q5VW22 663 aa11.79□□□□□ -0.52
LINC00173-201ENST00000470091 LIPNQ5VXI9 398 aa11.79□□□□□ -0.52
LINC00173-201ENST00000470091 DMKNQ6E0U4 476 aaPredicted RBP11.79□□□□□ -0.52
LINC00173-201ENST00000470091 OR7E24Q6IFN5 339 aa11.79□□□□□ -0.52
LINC00173-201ENST00000470091 KRT77Q7Z794 578 aa11.79□□□□□ -0.52
LINC00173-201ENST00000470091 OR10S1Q8NGN2 331 aa11.79□□□□□ -0.52
LINC00173-201ENST00000470091 MAP6Q96JE9 813 aa11.79□□□□□ -0.52
LINC00173-201ENST00000470091 DCUN1D5Q9BTE7 237 aa11.79□□□□□ -0.52
LINC00173-201ENST00000470091 CENPOQ9BU64 300 aa11.79□□□□□ -0.52
LINC00173-201ENST00000470091 REPIN1Q9BWE0 567 aaKnown RBP11.79□□□□□ -0.52
LINC00173-201ENST00000470091 CACNG6Q9BXT2 260 aa11.79□□□□□ -0.52
LINC00173-201ENST00000470091 RNF167Q9H6Y7 350 aa11.79□□□□□ -0.52
LINC00173-201ENST00000470091 ASH2LQ9UBL3 628 aa11.79□□□□□ -0.52
LINC00173-201ENST00000470091 LRP12Q9Y561 859 aa11.79□□□□□ -0.52
LINC00173-201ENST00000470091 IGHV4-30-2A0A087WSY4 118 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 ZNF587BE7ETH6 402 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 M0R1B8 84 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 SLC22A1O15245 554 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 OGG1O15527 345 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 TACSTD2P09758 323 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 B4GALT1P15291 398 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 COX5AP20674 150 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 GUCA1AP43080 201 aaPredicted RBP11.78□□□□□ -0.52
LINC00173-201ENST00000470091 TGM4P49221 684 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 GDI2P50395 445 aaKnown RBP11.78□□□□□ -0.52
LINC00173-201ENST00000470091 FABP6P51161 128 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 RIDAP52758 137 aaKnown RBP11.78□□□□□ -0.52
LINC00173-201ENST00000470091 LSM6P62312 80 aaKnown RBP11.78□□□□□ -0.52
LINC00173-201ENST00000470091 SPOCK1Q08629 439 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 RPL22L1Q6P5R6 122 aaKnown RBP11.78□□□□□ -0.52
LINC00173-201ENST00000470091 KCTD18Q6PI47 426 aaPredicted RBP11.78□□□□□ -0.52
LINC00173-201ENST00000470091 KLHL24Q6TFL4 600 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 TMEM108Q6UXF1 575 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 KCTD20Q7Z5Y7 419 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 DTX2Q86UW9 622 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 ZNF679Q8IYX0 411 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 LRRC18Q8N456 261 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 OR2AJ1Q8NGZ0 328 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 SPATA3Q8NHX4 192 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 RNF133Q8WVZ7 376 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 SLAMF6Q96DU3 332 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 PGLYRP3Q96LB9 341 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 DCLRE1CQ96SD1 692 aaKnown RBP11.78□□□□□ -0.52
LINC00173-201ENST00000470091 FOXB1Q99853 325 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 C1orf198Q9H425 327 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 BARX1Q9HBU1 254 aaPredicted RBP11.78□□□□□ -0.52
LINC00173-201ENST00000470091 CENPMQ9NSP4 180 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 PTTG2Q9NZH5 202 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 UPB1Q9UBR1 384 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 FBXL3Q9UKT7 428 aa11.78□□□□□ -0.52
LINC00173-201ENST00000470091 CR1P17927 2039 aa11.77□□□□□ -0.52
LINC00173-201ENST00000470091 HEATR1Q9H583 2144 aaKnown RBP11.77□□□□□ -0.52
LINC00173-201ENST00000470091 OR6C65A6NJZ3 312 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 RNF212BA8MTL3 300 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 PLPP2O43688 288 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 CD5LO43866 347 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 RGS9O75916 674 aaPredicted RBP11.77□□□□□ -0.53
LINC00173-201ENST00000470091 H2BFMP0C1H6 154 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 PSMA1P25786 263 aaKnown RBP11.77□□□□□ -0.53
LINC00173-201ENST00000470091 CD40P25942 277 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 OPRL1P41146 370 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 NANOS3P60323 173 aaKnown RBP11.77□□□□□ -0.53
LINC00173-201ENST00000470091 ARF1P84077 181 aaKnown RBP11.77□□□□□ -0.53
LINC00173-201ENST00000470091 FABP5Q01469 135 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 MFGE8Q08431 387 aaPredicted RBP11.77□□□□□ -0.53
LINC00173-201ENST00000470091 MRPL28Q13084 256 aaKnown RBP11.77□□□□□ -0.53
LINC00173-201ENST00000470091 GPR50Q13585 617 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 RAB35Q15286 201 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 CCDC58Q4VC31 144 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 DNM1P46Q6ZS02 220 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 FBXL14Q8N1E6 418 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 OR13C5Q8NGS8 318 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 RPS4Y2Q8TD47 263 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 SMIM19Q96E16 107 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 RADILQ96JH8 1075 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 SH3GL3Q99963 347 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 DHRS9Q9BPW9 319 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 MROQ9BYG7 248 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 SSR3Q9UNL2 185 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 SLC25A15Q9Y619 301 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 ATP23Q9Y6H3 246 aa11.77□□□□□ -0.53
LINC00173-201ENST00000470091 TRBV2A0A0J9YWF9 115 aa11.76□□□□□ -0.53
LINC00173-201ENST00000470091 A8MV72 311 aaPredicted RBP11.76□□□□□ -0.53
LINC00173-201ENST00000470091 RPL36A-HNRNPH2H7BZ11 118 aa11.76□□□□□ -0.53
LINC00173-201ENST00000470091 GABRPO00591 440 aa11.76□□□□□ -0.53
LINC00173-201ENST00000470091 RER1O15258 196 aa11.76□□□□□ -0.53
LINC00173-201ENST00000470091 NPR2P20594 1047 aa11.76□□□□□ -0.53
LINC00173-201ENST00000470091 PTAFRP25105 342 aa11.76□□□□□ -0.53
LINC00173-201ENST00000470091 KIR3DL2P43630 455 aa11.76□□□□□ -0.53
LINC00173-201ENST00000470091 ALKBH1Q13686 389 aaKnown RBP11.76□□□□□ -0.53
LINC00173-201ENST00000470091 INSL4Q14641 139 aa11.76□□□□□ -0.53
LINC00173-201ENST00000470091 GABRA6Q16445 453 aa11.76□□□□□ -0.53
LINC00173-201ENST00000470091 C22orf42Q6IC83 251 aa11.76□□□□□ -0.53
LINC00173-201ENST00000470091 CLEC2AQ6UVW9 174 aa11.76□□□□□ -0.53
LINC00173-201ENST00000470091 ZNF813Q6ZN06 617 aa11.76□□□□□ -0.53
LINC00173-201ENST00000470091 MUC15Q8N387 334 aa11.76□□□□□ -0.53
LINC00173-201ENST00000470091 PRSS35Q8N3Z0 413 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms