RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 ALOX5APP20292 161 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 RAB3BP20337 219 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 APEX1P27695 318 aaKnown RBP15.33■□□□□ 0.05
MRPL28-208ENST00000469744 THBS2P35442 1172 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 ASAH1Q13510 395 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 GABRA6Q16445 453 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 ZNF672Q499Z4 452 aaPredicted RBP15.33■□□□□ 0.05
MRPL28-208ENST00000469744 SFXN4Q6P4A7 337 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 CNIH2Q6PI25 160 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 H1FNTQ75WM6 255 aaPredicted RBP15.33■□□□□ 0.05
MRPL28-208ENST00000469744 LRRC28Q86X40 367 aaPredicted RBP15.33■□□□□ 0.05
MRPL28-208ENST00000469744 KDM8Q8N371 416 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 ADPRHL1Q8NDY3 354 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 ZNF417Q8TAU3 575 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 ASB17Q8WXJ9 295 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 FBXW5Q969U6 566 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 TMEM45BQ96B21 275 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 TSSK2Q96PF2 358 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 ZNF587Q96SQ5 575 aaPredicted RBP15.33■□□□□ 0.05
MRPL28-208ENST00000469744 GSX2Q9BZM3 304 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 SYT4Q9H2B2 425 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 ABRACLQ9P1F3 81 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 TBC1D24Q9ULP9 559 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 TLN2Q9Y4G6 2542 aa15.33■□□□□ 0.05
MRPL28-208ENST00000469744 SMIM30A4D0T7 59 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 NOTOA8MTQ0 251 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 ABCD4O14678 606 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 UPK3AO75631 287 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 ABHD16AO95870 558 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 CRABP1P29762 137 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 DAP3P51398 398 aaKnown RBP15.33■□□□□ 0.04
MRPL28-208ENST00000469744 PUDPQ08623 228 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 SPOCK1Q08629 439 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 BAK1Q16611 211 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 IDNKQ5T6J7 187 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 FDX2Q6P4F2 183 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 CCBE1Q6UXH8 406 aaPredicted RBP15.33■□□□□ 0.04
MRPL28-208ENST00000469744 NR2C2APQ86WQ0 139 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 CIARTQ8N365 385 aaPredicted RBP15.33■□□□□ 0.04
MRPL28-208ENST00000469744 RNF166Q96A37 237 aaPredicted RBP15.33■□□□□ 0.04
MRPL28-208ENST00000469744 C18orf12Q96KH6 178 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 CMTM3Q96MX0 182 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 SF3B5Q9BWJ5 86 aaKnown RBP15.33■□□□□ 0.04
MRPL28-208ENST00000469744 SLCO5A1Q9H2Y9 848 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 CYSLTR2Q9NS75 346 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 C14orf119Q9NWQ9 140 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 MRM2Q9UI43 246 aaKnown RBP15.33■□□□□ 0.04
MRPL28-208ENST00000469744 LAMP5Q9UJQ1 280 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 B3GALT5Q9Y2C3 310 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 SLC25A15Q9Y619 301 aa15.33■□□□□ 0.04
MRPL28-208ENST00000469744 HEATR1Q9H583 2144 aaKnown RBP15.32■□□□□ 0.04
MRPL28-208ENST00000469744 NSD1Q96L73 2696 aaPredicted RBP15.32■□□□□ 0.04
MRPL28-208ENST00000469744 IGLV1-36A0A0B4J1U3 117 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 SLC22A23A1A5C7 686 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 FAM171A2A8MVW0 826 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 SHISA9B4DS77 424 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 MS4A18H0YCH9 400 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 PDCD5O14737 125 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 CSF3P09919 207 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 AHCYP23526 432 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 RANBP1P43487 201 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 SELENOPP49908 381 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 ALKBH1Q13686 389 aaKnown RBP15.32■□□□□ 0.04
MRPL28-208ENST00000469744 MS4A18Q3C1V0 323 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 PYDC2Q56P42 97 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 DNM1P34Q6PK57 102 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 LYPD4Q6UWN0 246 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 CREB3L2Q70SY1 520 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 Q71RC1 249 aaPredicted RBP15.32■□□□□ 0.04
MRPL28-208ENST00000469744 CADM3Q8N126 398 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 WDR31Q8NA23 367 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 OTOSQ8NHW6 89 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 THRSPQ92748 146 aa15.32■□□□□ 0.04
MRPL28-208ENST00000469744 A0A1W2PQ09 198 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 PRR32B1ATL7 298 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 H7C1C5 153 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 H7C1Q1 480 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 M0R1B8 84 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 MAGEB4O15481 346 aaPredicted RBP15.31■□□□□ 0.04
MRPL28-208ENST00000469744 FOSL1P15407 271 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 NPR2P20594 1047 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 PSMB10P40306 273 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 ATP5J2P56134 94 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 LCN6P62502 163 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 HSD17B12Q53GQ0 312 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 FAM27D1Q5T7N8 215 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 LIPNQ5VXI9 398 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 PIAS4Q8N2W9 510 aaPredicted RBP15.31■□□□□ 0.04
MRPL28-208ENST00000469744 YIPF7Q8N8F6 280 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 ZNF454Q8N9F8 522 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 ASB10Q8WXI3 467 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 HTRA1Q92743 480 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 ALKBH3Q96Q83 286 aaPredicted RBP15.31■□□□□ 0.04
MRPL28-208ENST00000469744 TTTY10Q9BZA0 68 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 RABL2AQ9UBK7 228 aaPredicted RBP15.31■□□□□ 0.04
MRPL28-208ENST00000469744 RABL2BQ9UNT1 228 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 RASD1Q9Y272 281 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 KLHDC2Q9Y2U9 406 aa15.31■□□□□ 0.04
MRPL28-208ENST00000469744 TVP23AA6NH52 213 aa15.3■□□□□ 0.04
MRPL28-208ENST00000469744 SMAD7O15105 426 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms