RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 SOAT1P35610 550 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 CSNK1A1P48729 337 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 SRP9P49458 86 aaKnown RBP3.79□□□□□ -1.8
VPS8-219ENST00000469479 SERPINB9P50453 376 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 ZNF75DP51815 510 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 HSF2Q03933 536 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 ACSM1Q08AH1 577 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 COX10Q12887 443 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 EPS8Q12929 822 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 HNF4GQ14541 408 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 KIAA0040Q15053 153 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 MAPK14Q16539 360 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 ZNF404Q494X3 552 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 FAM69AQ5T7M9 428 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 WDR25Q64LD2 544 aaPredicted RBP3.79□□□□□ -1.8
VPS8-219ENST00000469479 ANKRD26P1Q6NSI1 321 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 RNF165Q6ZSG1 346 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 RPS27LQ71UM5 84 aaKnown RBP3.79□□□□□ -1.8
VPS8-219ENST00000469479 SMIM29Q86T20 159 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 CALHM3Q86XJ0 350 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 CCDC28AQ8IWP9 274 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 C17orf53Q8N3J3 647 aaPredicted RBP3.79□□□□□ -1.8
VPS8-219ENST00000469479 SCAIQ8N9R8 606 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 RBM15BQ8NDT2 890 aaKnown RBP3.79□□□□□ -1.8
VPS8-219ENST00000469479 OR5D16Q8NGK9 328 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 OR6S1Q8NH40 331 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 KLF14Q8TD94 323 aaPredicted RBP3.79□□□□□ -1.8
VPS8-219ENST00000469479 CNOT9Q92600 299 aaKnown RBP3.79□□□□□ -1.8
VPS8-219ENST00000469479 SLC38A4Q969I6 547 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 L3HYPDHQ96EM0 354 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 SLC35G5Q96KT7 338 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 FCRL1Q96LA6 429 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 COG8Q96MW5 612 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 TSSK3Q96PN8 268 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 TRNT1Q96Q11 434 aaKnown RBP3.79□□□□□ -1.8
VPS8-219ENST00000469479 CHID1Q9BWS9 393 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 MTHFD2LQ9H903 347 aaPredicted RBP3.79□□□□□ -1.8
VPS8-219ENST00000469479 MID1IP1Q9NPA3 183 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.79□□□□□ -1.8
VPS8-219ENST00000469479 B3GAT1Q9P2W7 334 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 ERVK-18Q9QC07 812 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 TIMM22Q9Y584 194 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 MAB21L2Q9Y586 359 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 KPTNQ9Y664 436 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 KCNE3Q9Y6H6 103 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 SMAD5-AS1Q9Y6J3 95 aa3.79□□□□□ -1.8
VPS8-219ENST00000469479 DNAH1Q9P2D7 4330 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 IGLV5-52A0A0A0MRZ9 124 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 RNF103-CHMP3A0A140T963 221 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 A0A1B0GU03 582 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 GMNCA6NCL1 334 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 HMX3A6NHT5 357 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 AP3D1O14617 1153 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 ACTL6BO94805 426 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 INHBAP08476 426 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 VIMP08670 466 aaKnown RBP3.78□□□□□ -1.8
VPS8-219ENST00000469479 NR2C1P13056 603 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 IRF2P14316 349 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 NQO1P15559 274 aaKnown RBP3.78□□□□□ -1.8
VPS8-219ENST00000469479 IL7RP16871 459 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 TCP1P17987 556 aaKnown RBP3.78□□□□□ -1.8
VPS8-219ENST00000469479 NCF2P19878 526 aaPredicted RBP3.78□□□□□ -1.8
VPS8-219ENST00000469479 AZU1P20160 251 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 PRPS1L1P21108 318 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 STOMP27105 288 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 CHATP28329 748 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 MAGEA12P43365 314 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 GDI2P50395 445 aaKnown RBP3.78□□□□□ -1.8
VPS8-219ENST00000469479 PRKAA2P54646 552 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 ERVS71-1P61550 626 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 PPP1CBP62140 327 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 PUDPQ08623 228 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 CDONQ4KMG0 1287 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 LIN52Q52LA3 116 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 UNC50Q53HI1 259 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 TEX35Q5T0J7 233 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 THEM4Q5T1C6 240 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 TYW3Q6IPR3 259 aaKnown RBP3.78□□□□□ -1.8
VPS8-219ENST00000469479 WDR93Q6P2C0 686 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 C16orf89Q6UX73 402 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 C1orf122Q6ZSJ8 110 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 SLC16A14Q7RTX9 510 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 HDDC2Q7Z4H3 204 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 C6orf120Q7Z4R8 191 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 PXKQ7Z7A4 578 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 COMTD1Q86VU5 262 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 CPOQ8IVL8 374 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 SKA3Q8IX90 412 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 KLHL7Q8IXQ5 586 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 PEX5LQ8IYB4 626 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 SPC24Q8NBT2 197 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 OR2Z1Q8NG97 314 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 C8orf46Q8TAG6 207 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 SLC7A13Q8TCU3 470 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 C10orf82Q8WW14 230 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 LHX4Q969G2 390 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 SLC35B4Q969S0 331 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 ERGIC1Q969X5 290 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 ROPN1LQ96C74 230 aa3.78□□□□□ -1.8
VPS8-219ENST00000469479 SLC25A36Q96CQ1 311 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms