RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 TRAPPC6AO75865 159 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 GABARAPO95166 117 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 CTSLP07711 333 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 IGFBP3P17936 291 aaPredicted RBP2.78□□□□□ -1.96
SMC4-208ENST00000467468 TCP1P17987 556 aaKnown RBP2.78□□□□□ -1.96
SMC4-208ENST00000467468 CD9P21926 228 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 DEKP35659 375 aaKnown RBP2.78□□□□□ -1.96
SMC4-208ENST00000467468 MYCNOSP40205 109 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 UBE2AP49459 152 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 UBE2E1P51965 193 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 SYNJ2BPP57105 145 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 UBE2NP61088 152 aaKnown RBP2.78□□□□□ -1.96
SMC4-208ENST00000467468 PAFAH1B2P68402 229 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 RPL18AQ02543 176 aaKnown RBP2.78□□□□□ -1.96
SMC4-208ENST00000467468 DGCR6Q14129 220 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 GPR176Q14439 515 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 CAPRIN1Q14444 709 aaKnown RBP2.78□□□□□ -1.96
SMC4-208ENST00000467468 PSG3Q16557 428 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 CPTPQ5TA50 214 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 APOBEC3HQ6NTF7 200 aaKnown RBP2.78□□□□□ -1.96
SMC4-208ENST00000467468 DNAJC24Q6P3W2 148 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 CD300LGQ6UXG3 332 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 NDUFAF7Q7L592 441 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 RAB43Q86YS6 212 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 DAW1Q8N136 415 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 METTL13Q8N6R0 699 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 Q8N9W7 124 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 OR11H7Q8NGC8 314 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 OR6N2Q8NGY6 317 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 ELSPBP1Q96BH3 223 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 UBE2E2Q96LR5 201 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 KCNS3Q9BQ31 491 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 CHRNA10Q9GZZ6 450 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 SYT4Q9H2B2 425 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 SYNDIG1Q9H7V2 258 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 RGS18Q9NS28 235 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 CHMP5Q9NZZ3 219 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 NYAP2Q9P242 653 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 SLC17A7Q9P2U7 560 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 ZNF257Q9Y2Q1 563 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 CACNG2Q9Y698 323 aa2.78□□□□□ -1.96
SMC4-208ENST00000467468 EIF4G1Q04637 1599 aaKnown RBP2.78□□□□□ -1.96
SMC4-208ENST00000467468 PALLDQ8WX93 1383 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 ASTN1O14525 1302 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 MAP3K15Q6ZN16 1313 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 A0A0J9YXV3 536 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 TRIM49D1C9J1S8 452 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 PANO1I0J062 215 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 DFFAO00273 331 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 CTNSO60931 367 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 ALOX12BO75342 701 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 CA11O75493 328 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 PCCAP05165 728 aaPredicted RBP2.77□□□□□ -1.97
SMC4-208ENST00000467468 RHOCP08134 193 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 MYL9P24844 172 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 DRD3P35462 400 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 SPAM1P38567 509 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 HCCSP53701 268 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 TAS2R60P59551 318 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 USF2Q15853 346 aaPredicted RBP2.77□□□□□ -1.97
SMC4-208ENST00000467468 NDUFAF6Q330K2 333 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 AVPI1Q5T686 147 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 DUPD1Q68J44 220 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 NCCRP1Q6ZVX7 275 aaPredicted RBP2.77□□□□□ -1.97
SMC4-208ENST00000467468 CDKL3Q8IVW4 592 aaPredicted RBP2.77□□□□□ -1.97
SMC4-208ENST00000467468 SYCE1Q8N0S2 351 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 LINC00469Q8N7U9 141 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 LGALS14Q8TCE9 139 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 ABHD3Q8WU67 409 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 TMEM234Q8WY98 164 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 EXOSC8Q96B26 276 aaKnown RBP2.77□□□□□ -1.97
SMC4-208ENST00000467468 CPB2Q96IY4 423 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 OSBPL11Q9BXB4 747 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 SLIRPQ9GZT3 109 aaKnown RBP2.77□□□□□ -1.97
SMC4-208ENST00000467468 SPNS1Q9H2V7 528 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 EDA2RQ9HAV5 297 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 PDFQ9HBH1 243 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 VCX3AQ9NNX9 186 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 MYOZ1Q9NP98 299 aaPredicted RBP2.77□□□□□ -1.97
SMC4-208ENST00000467468 TREM1Q9NP99 234 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 TREX1Q9NSU2 369 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 PRG3Q9Y2Y8 225 aaPredicted RBP2.77□□□□□ -1.97
SMC4-208ENST00000467468 UBIAD1Q9Y5Z9 338 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 GMEB1Q9Y692 573 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 MEGF6O75095 1541 aa2.77□□□□□ -1.97
SMC4-208ENST00000467468 MAP3K19Q56UN5 1328 aa2.76□□□□□ -1.97
SMC4-208ENST00000467468 RP2O75695 350 aa2.76□□□□□ -1.97
SMC4-208ENST00000467468 ZMPSTE24O75844 475 aa2.76□□□□□ -1.97
SMC4-208ENST00000467468 SEMA3DO95025 777 aa2.76□□□□□ -1.97
SMC4-208ENST00000467468 THRAP10827 490 aa2.76□□□□□ -1.97
SMC4-208ENST00000467468 PRPS2P11908 318 aa2.76□□□□□ -1.97
SMC4-208ENST00000467468 ADRB3P13945 408 aa2.76□□□□□ -1.97
SMC4-208ENST00000467468 HOXA9P31269 272 aa2.76□□□□□ -1.97
SMC4-208ENST00000467468 ARL2P36404 184 aa2.76□□□□□ -1.97
SMC4-208ENST00000467468 ARR3P36575 388 aa2.76□□□□□ -1.97
SMC4-208ENST00000467468 RBM34P42696 430 aaKnown RBP2.76□□□□□ -1.97
SMC4-208ENST00000467468 ARG2P78540 354 aa2.76□□□□□ -1.97
SMC4-208ENST00000467468 KDSRQ06136 332 aa2.76□□□□□ -1.97
SMC4-208ENST00000467468 ST3GAL4Q11206 333 aa2.76□□□□□ -1.97
SMC4-208ENST00000467468 ERCC8Q13216 396 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms